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Job DescriptionP12998
Confidence20.12%DateWed Jan 25 15:20:38 GMT 2012
Rank367Aligned Residues154
% Identity15%Templatec2iy3A_
PDB info PDB header:rna-bindingChain: A: PDB Molecule:signal recognition particle protein ffh; PDBTitle: structure of the e. coli signal recognition particle2 bound to a translating ribosome
Resolution16.00 Å

  Insertion relative to template
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  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   55....60.........70.........80.........90.........100. ..... ...110........
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Query Sequence  HPQIIRAWQQGAEQFGIGSGGSGHVSGYSVVHQALEEELAEWLGYSR. . . . . . . . . . ALLFI. . . . . . SGFAANQAVIAA
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Template Sequence  NLEVARDFVERVREEALGKQVLESLTPAEVILATVYEALKEALGGEARLPVLKDRNLWFLVGLQGSGKTTTAAKLALYYK
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   44.....50.........60.........70.........80.........90.........100.........110.........120...
 
   119120.........130.........140. ........150.........160.... .....170....... ..180........
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Query Sequence  MMAKEDRIAADRLSHASLLEAAS. . LSPSQLRRFAHNDVTHLARLLAS. . . . . PCPGQQMVVTEGV. . . FSMDGDSAPLA
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Template Sequence  GKGRRPLLVAADTQRPAAREQLRLLGEKVGVPVLEVMDGESPESIRRRVEEKARLEARDLILVDTAGRLQIDEPLMGELA
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   124.....130.........140.........150.........160.........170.........180.........190.........200...
 
   189190.........200........
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Query Sequence  EIQQVTQQHNGWLMVDDAHG
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Template Sequence  RLKEVLGPDEVLLVLDAMTG
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   204.....210.........220...
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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