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Job DescriptionP12998
Confidence100.00%DateWed Jan 25 15:20:38 GMT 2012
Rank55Aligned Residues337
% Identity15%Templatec2dkjB_
PDB info PDB header:transferaseChain: B: PDB Molecule:serine hydroxymethyltransferase; PDBTitle: crystal structure of t.th.hb8 serine hydroxymethyltransferase
Resolution1.15 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3940.... .....50.........60....... ..70.........80... ......90.........100.. .......110..
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Query Sequence  RQYLNF. SSNDYLGLSHHPQIIRAWQQGAE. QFGIGSGGSGHVSGYS. . . VVHQALEEELAEWLGYSRA. LLFISGFAAN
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Template Sequence  REGLELIASENF. . . . VSKQVREAVGSVLTNKYAEGYPGARYYGGCEVIDRVESLAIERAKALFGAAWANVQPHSGSQAN
Template Known Secondary structure  S

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TSGGGG



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   23......30.... .....40.........50.........60.........70.........80.........90........
 
   113......120.........130.... .....140.........150... ......160.........170.........180....
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Query Sequence  QAVIAAMMAKEDRIAADRLSHA. . . SLLEAASLSPSQLRRFAHN. . . . . DVTHLARLLASPCPGQQMVVTEGVFSMDGDS
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Template Sequence  MAVYMALMEPGDTLMGMDLAAGGHLTHGSRVNFSGKLYKVVSYGVRPDTELIDLEEVRRLALEHRPKVIVAGASAY. PRF
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TT

GGGT

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   99100.........110.........120.........130.........140.........150.........160.........170.... ...
 
   185....190.........200.........210.........220.........230........ .240.........250.........260...
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Query Sequence  APLAEIQQVTQQHNGWLMVDDAHGTGVIGEQGRGSCWLQKVKPELLVVTFGKGF. GVSGAAVLCSSTVADYLLQFARHLI
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Template Sequence  WDFKAFREIADEVGAYLVVDMAHFAGLVAAGLHPNPL. . . PYAHVVTSTTHKTLRGPRGGLILSNDPELGKRIDKLIFPG
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T

TTTTTSS


T...TT
SSSGGG


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   178.180.........190.........200.........210.... .....220.........230.........240.........250....
 
   264.....270.........280.........290.........300.........310....... ..320..... ....330.........340
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Query Sequence  YSTSMPPAQAQALRASLAVIRSDEGDARREKLAALITRFRAGVQDLPFTLADSC. . SAIQPLIV. GDNSRALQLAEKLRQ
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Template Sequence  IQGGPLEHVIAGKAVAFFEALQPEFKEYSRLVVENAKRLAEELARRGYRIVTGGTDNHLFLVDLRPKGLTGKEAEERLDA
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TSTTT
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   255....260.........270.........280.........290.........300.........310.........320.........330....
 
   341........350...... ...360..... ....370.........380...
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Query Sequence  QGCWVTAIRPPTVPAG. . . TARLRLTLT. . . . AAHEMQDIDRLLEVLHGN
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Template Sequence  VGITVNKNAIPFDPKPPRVTSGIRIGTPAITTRGFTPEEMPLVAELIDRA
Template Known Secondary structure  TT


TT

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   335....340.........350.........360.........370.........380....
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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