Job Description P0AGA2 Confidence 4.73% Date Thu Jan 5 11:28:35 GMT 2012 Rank 49 Aligned Residues 46 % Identity 17% Template c3pt2A_ PDB info PDB header:hydrolase/protein binding Chain: A: PDB Molecule:rna polymerase; PDBTitle: structure of a viral otu domain protease bound to ubiquitin Resolution 2.50 Å

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		340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.		.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.
Predicted Secondary structure																					.
Query SS confidence																					.
Query Sequence		R	E	T	A	D	N	L	K	K	S	G	A	F	V	P	G	I	R	P	.	G	E	Q	T	A	K	Y	I	D	K	V	M	T	R	L	T	L	V	G	A	L	Y	I	T	F	I	C
Query Conservation																					.
Alig confidence																					.
Template Conservation
Template Sequence		R	L	T	E	S	A	A	R	K	Y	Y	Q	E	E	P	E	A	R	L	V	G	L	S	L	E	D	Y	L	K	R	X	L	S	D	N	E	W	G	S	T	L	E	A	S	X	L	A
Template Known Secondary structure												G	G	G		T	T																	S	T	T
Template Predicted Secondary structure
Template SS confidence
		63	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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