Return to main results Retrieve Phyre Job Id

Job DescriptionP0AGA2
Confidence4.13%DateThu Jan 5 11:28:35 GMT 2012
Rank60Aligned Residues97
% Identity8%Templatec2zxeA_
PDB info PDB header:hydrolase/transport proteinChain: A: PDB Molecule:na, k-atpase alpha subunit; PDBTitle: crystal structure of the sodium - potassium pump in the e2.2k+.pi2 state
Resolution2.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   336...340.........350.........360.........370.........380.........390.........400..... .
Predicted Secondary structure 




















.........
Query SS confidence 





































































. . . . . . . . .
Query Sequence  VFNPRETADNLKKSGAFVPGIRPGEQTAKYIDKVMTRLTLVGALYITFICLIPEFMRDAMKVPFYFGGTS. . . . . . . . . L
Query Conservation     
  


 
 
 
  






  
  

   
   
  

  
  

 

 
           



.........
Alig confidence 















...


















































.........
Template Conservation 


  
        
 ...
        
    
           
                               

 
Template Sequence  GLTNARAKEILARDGP. . . NSLTPPPTTPEWIKFCRQLFGGFSILLWIGAILCFLAYGIQAATEDEPANDNLYLGVVLST
Template Known Secondary structure 
B


...S








TTTTSTSS




Template Predicted Secondary structure 




...





















Template SS confidence 















































































   62.......70....... ..80.........90.........100.........110.........120.........130........
 
   407..410.........420.........430.....
Predicted Secondary structure 
Query SS confidence 




























Query Sequence  LIVVVVIMDFMAQVQTLMMSSQYESALKK
Query Conservation 

 


      

        
    
 
Alig confidence 




























Template Conservation         
              
      
Template Sequence  VVIVTGCFSYYQEAKSSRIMDSFKNMVPQ
Template Known Secondary structure  T




TTS
S
Template Predicted Secondary structure 


Template SS confidence 




























   139140.........150.........160.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions