 |
Job Description | P0AGA2 | Confidence | 4.27% | Date | Thu Jan 5 11:28:35 GMT 2012 |
Rank | 56 | Aligned Residues | 18 |
% Identity | 28% | Template | c2ariA_ |
PDB info |
PDB header:viral protein | Chain: A: PDB Molecule:envelope polyprotein gp160; |
PDBTitle: solution structure of micelle-bound fusion domain of hiv-12 gp41
|
Resolution | UNK |
|
  |   |
376 | . | . | . | 380 | . | . | . | . | . | . | . | . | . | 390 | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
V | G | A | L | Y | I | T | F | I | C | L | I | P | E | F | M | R | D |
Query Conservation |   |
  |
|
|   |   |
|   |   |
|
|   |
|
|   |
|   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|   |   |
|
|
|
|
|   |
|
|
|
|
|
|
|
|
Template Sequence |   |
I | G | A | L | F | L | G | F | L | G | A | A | G | S | T | M | G | A |
Template Known Secondary structure |   |
T |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
5 | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|