Job Description P0AGA2 Confidence 5.59% Date Thu Jan 5 11:28:35 GMT 2012 Rank 35 Aligned Residues 85 % Identity 13% Template c1mhsA_ PDB info PDB header:membrane protein, proton transport Chain: A: PDB Molecule:plasma membrane atpase; PDBTitle: model of neurospora crassa proton atpase Resolution 8.00 Å

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		336	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	F	N	P	R	E	T	A	D	N	L	K	K	S	G	A	F	V	P	G	I	R	P	G	E	Q	T	A	K	Y	I	D	K	V	M	T	R	L	T	L	V	G	A	L	Y	I	T	F	I	C	L	I	P	E	F	M	R	D	A	M	K	V	P	F	Y	F	G	G	T	S	L	L	I	V	V	V	V	I	M	D
Query Conservation
Alig confidence																																											.	.	.	.															.	.	.	.
Template Conservation																																											.	.	.	.															.	.	.	.
Template Sequence		G	L	T	S	E	E	V	V	Q	R	R	R	K	Y	G	L	N	Q	M	K	E	E	K	E	N	H	F	L	K	F	L	G	F	F	V	G	P	I	Q	F	V	.	.	.	.	M	E	G	A	A	V	L	A	A	G	L	E	D	W	.	.	.	.	V	D	F	G	V	I	C	G	L	L	L	L	N	A	V	V	G
Template Known Secondary structure					S										T	S	S	S	S							S	S					T											.	.	.	.									T	T		S		S	.	.	.	.	S
Template Predicted Secondary structure																																											.	.	.	.															.	.	.	.
Template SS confidence
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.					.	.	130	.	.	.	.	.	.	.	.	.	140	.					.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
		416	.	.	.	420	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	M	A	Q	V	Q	T	L	M	M	S	S	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	V	Q	E	F	Q	A	G	S	I	V	D	E
Template Known Secondary structure														T
Template Predicted Secondary structure
Template SS confidence
		159	160	.	.	.	.	.	.	.	.	.	170	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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