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Job DescriptionP77357
Confidence99.96%DateThu Jan 5 12:28:08 GMT 2012
Rank45Aligned Residues243
% Identity23%Templated1r3na1
SCOP infoPhosphorylase/hydrolase-like Zn-dependent exopeptidases Bacterial dinuclear zinc exopeptidases
Resolution2.70

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   910.........20.... .....30.........40.........50.........60.........70....
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Query Sequence  NSLAPKLSHWRRDFHH. . . . . . . . . . . . . . YAESGWVEFRTATLVAEELHQLGYSLALGREVVNESSRMGLPDEFTLQRE
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Template Sequence  GRLNQTILETGSQFGGVARWGQESHEFGMRRLAGTALDGAMRDWFTNECESLGCKVKVDKIG. . . . . . . . . . . . . . . . . .
Template Known Secondary structure  TTT


SSSTT




TTST
BTTS..................
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   33......40.........50.........60.........70.........80.........90....
 
   75....80.........90.........100.........110.........120.........130.........140.........150....
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Query Sequence  FERARQQGALAQWIAAFEGGFTGIVATLDTGRPGPVMAFRVDMDALDLSEEQDVSHRPYRDGFASCNAGMMHACGHDGHT
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . NMFAVYPGKNGGKPTATGSHLDTQPEA. . . . . . . . . . . . . . . . . . . . . . GKYDGILGV
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SS
SS





SSB......................
SSTT
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   95....100.........110.........120. ........130
 
   155....160.........170.........180.........190...
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Query Sequence  AIGLGLAHTLKQFESGLHGVIKLIFQPAEEGTRGARAMV. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  LAGLEVLRTFKDNNYVPNYDVCVVVWFNEEGARFARSCTGSSVWSHDLSLEEAYGLMSVGEDKPESVYDSLKNIGYIGDT
Template Known Secondary structure  TT


SS

S
SS
SSBSSTTTTSS
T
BBSS
SS

BTT


SB
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   131........140.........150.........160.........170.........180.........190.........200.........210
 
   194.....200.........210... ......220.........230.........240.........250.........260.........
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Query Sequence  . DAGVVDDVDYFTAVHIGTGV. . . PAGTVVCGSDNFMATTKFDAHFTGTAAHAGAKPEDGHNALLAAAQATLALHAIAPH
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Template Sequence  PASYKENEIDAHFELHIEQGPILEDENKAIGIVTGVQAVNFHEVCIECVSRSAFAQFKKDQ. . . . . . . . . . . . . . . . . . .
Template Known Secondary structure 

STTTS

S
SSSTT
S



TTS
GGG...................
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   211........220.........230.........240.........250.........260.........270.
 
   270.........280.........290.........300.........310.........320.........330.........340.........
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Query Sequence  SEGASRVNVGVMQAGSGRNVVPASALLKVETRGASDVINQYVFDRAQQAIQGAATMYGVGVETRLMGAATASSPSPQWVA
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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   350.........360.........370.........380.........390.........400.........410.........420.........
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Query Sequence  WLQSQAAQVAGVNQAIERVEAPAGSEDATLMMARVQQHQGQASYVVFGTQLAAGHHNEKFDFDEQVLAIAVETLARTALN
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Template Sequence  . . . . . . . . . . . . . . . . VRQIWSGAGHDSCQT. . . . . APHVPTSMIFI. PSKDGLSHNYYEYSSPEEIENGFKVLLQAIIN
Template Known Secondary structure  ................SS

T.....TTTS
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GGG

SSTT



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   388.390.........400.. .......410... ......420.........430.........440.....
 
   430....
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Query Sequence  FPWTR
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Template Conservation 

   
Template Sequence  YDNYR
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   446...450
 
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No model constructed - rank, confidence too low




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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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