 |
Job Description | P77357 | Confidence | 99.80% | Date | Thu Jan 5 12:28:08 GMT 2012 |
Rank | 56 | Aligned Residues | 112 |
% Identity | 28% | Template | d1cg2a2 |
SCOP info | Ferredoxin-like
| Bacterial exopeptidase dimerisation domain
| Bacterial exopeptidase dimerisation domain
|
Resolution | 2.50 |
|
 |
  |   |
227 | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | T | T | K | F | D | A | H | F | T | G | T | A | A | H | A | G | A | K | P | E | D | G | H | N | A | L | L | A | A | A | Q | A | T | L | A | L | H | A | I | A | P | H | S | E | G | A | S | R | V | N | V | G | V | M | Q | A | G | S | G | R | N | V | V | P | A | S | A | L | L | K | V | E | T | R | G | A | S | D | V |
Query Conservation |   |
  |   |   |   |   |   |
|   |   |   |
|   |   |   |
|
|
|   |   |
|   |   |
|   |
|
|
|   |   |   |   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |
|
|   |   |   |
|
|
|
|   |   |   |   |   |   |   |
|
|
|   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |   |   |   |
|   |
|   |
|
|   |
|
|
|
|   |   |
|   |   |
|   |
|
|
|   |   |   |   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |   | . |   |   |   |   |   |   |   |
|   |
|
|   |   |   |
|
|
|
|   |   |
|   |   |   |   |   |
|
|   |   |   |   |   |
Template Sequence |   |
G | I | A | Y | V | Q | V | N | I | T | G | K | A | S | H | A | G | A | A | P | E | L | G | V | N | A | L | V | E | A | S | D | L | V | L | R | T | M | N | I | D | D | K | A | K | N | . |
L | R | F | N | W | T | I | A | K | A | G | N | V | S | N | I | I | P | A | S | A | T | L | N | A | D | V | R | Y | A | R | N | E |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
| B |
|  |  | T | T | S |
| G | G | G | S | B |
|  |  |  |  |  |  |  |  |  |  |  |  | G | G | G |
| B | T | T | T | T | . |  |  |  |  |  |  |  |  |  |  |
| S | S | T | T |  |  |
| S |  |  |  |  |  |  |  |  |  |  | S | S |  |  |
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
| . |
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
215 | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | |
. | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . |
  |
  |   |
307 | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
I | N | Q | Y | V | F | D | R | A | Q | Q | A | I | Q | G | A | A | T | M | Y | G | V | G | V | E | T | R | L | M | G | A | A | T | A |
Query Conservation |   |
  |   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|   |
|   |   |   |
|   |   |   |   |   |   | . |   |   |   |   |   |   |   |
|   |
|   |   |   |   |   |   |
|
|
Template Sequence |   |
D | F | D | A | A | M | K | T | L | E | E | R | A | Q | Q | . |
K | K | L | P | E | A | D | V | K | V | I | V | T | R | G | R | P | A |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  | T | S | . |
| S | S | T | T |
|  |  |  |  |  |  |  |  |
| S |
|
|
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |
| . |
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
294 | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | |
. | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|