Job Description P77357 Confidence 100.00% Date Thu Jan 5 12:28:08 GMT 2012 Rank 2 Aligned Residues 364 % Identity 22% Template c3ramC_ PDB info PDB header:hydrolase Chain: C: PDB Molecule:hmra protein; PDBTitle: crystal structure of hmra Resolution 2.70 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	S	L	N	Q	F	V	N	S	L	A	P	K	L	S	H	W	R	R	D	F	H	H	Y	A	E	S	G	W	V	E	F	R	T	A	T	L	V	A	E	E	L	H	Q	L	G	Y	S	L	A	L	G	R	E	V	V	N	E	S	S	R	M	G	L	P	D	E	F	T	L	Q	R	E	F	E	R	A	R	Q	Q
Query Conservation
Alig confidence																																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Q	Q	I	L	D	Y	I	E	T	N	K	Y	S	Y	I	E	I	S	H	R	I	H	E	R	P	E	L	G	N	E	E	I	F	A	S	R	T	L	I	D	R	L	K	E	H	D	F	E	I	E	T	E	I	A	G	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure											T														S			B	T	T															T	T	T								T	T		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	A	L	A	Q	W	I	A	A	F	E	G	G	F	T	G	I	V	A	T	L	D	T	G	R	P	G	P	V	M	A	F	R	V	D	M	D	A	L	D	L	S	E	E	Q	D	V	S	H	R	P	Y	R	D	G	F	A	S	C	N	A	G	M	M	H	A	C	G	H	D	G	H	T	A	I	G	L	G	L	A
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	A	T	G	F	I	A	T	Y	D	S	G	L	D	G	P	A	I	G	F	L	A	E	Y	D	A	L	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	L	G	H	A	C	G	H	N	I	I	G	T	A	S	V	L	G	A
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.											S	S	S	S											B		T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T	S	S	S	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
															61	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.																						.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.				.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
Predicted Secondary structure																											.	.	.
Query SS confidence																											.	.	.
Query Sequence		H	T	L	K	Q	F	E	S	G	L	H	G	V	I	K	L	I	F	Q	P	A	E	E	G	T	.	.	.	R	G	A	R	A	M	V	D	A	G	V	V	D	D	V	D	Y	F	T	A	V	H	I	G	T	G	V	P	A	G	T	V	V	C	G	S	D	N	F	M	A	T	T	K	F	D	A	H	F	T	G	T
Query Conservation																											.	.	.
Alig confidence																											.	.	.																											.	.	.	.	.	.
Template Conservation																																																								.	.	.	.	.	.
Template Sequence		I	G	L	K	Q	V	I	D	Q	I	G	G	K	V	V	V	L	G	C	P	A	E	E	G	G	E	N	G	S	A	K	A	S	Y	V	K	A	G	V	I	D	Q	I	D	I	A	L	X	I	H	P	G	N	E	.	.	.	.	.	.	T	Y	K	T	I	D	T	L	A	V	D	V	L	D	V	K	F	Y	G	K
Template Known Secondary structure													S										T	T			T	T											T	G	G	G	G		S									S	S	.	.	.	.	.	.	B	B					B													B
Template Predicted Secondary structure																																																								.	.	.	.	.	.
Template SS confidence
		107	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160							.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	A	H	A	G	A	K	P	E	D	G	H	N	A	L	L	A	A	A	Q	A	T	L	A	L	H	A	I	A	P	H	S	E	G	A	S	R	V	N	V	G	V	M	Q	A	G	S	G	R	N	V	V	P	A	S	A	L	L	K	V	E	T	R	G	A	S	D	V	I	N	Q	Y	V	F	D	R	A	Q	Q	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	A	H	A	S	E	N	A	D	E	A	L	N	A	L	D	A	X	I	S	Y	F	N	G	V	A	Q	L	R	Q	H	I	K	K	D	Q	R	V	H	G	V	I	L	D	G	G	K	A	A	N	I	I	P	D	Y	T	H	A	R	F	Y	T	R	A	X	T	R	K	E	L	D	I	L	T	E	K	V	N	Q	I
Template Known Secondary structure				B	T	T	T		G	G	G		B																	T	T	S	S		T	T												S		T	T	B			S											S	S
Template Predicted Secondary structure
Template SS confidence
		181	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260
		319	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.		.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.
Predicted Secondary structure																					.
Query SS confidence																					.
Query Sequence		I	Q	G	A	A	T	M	Y	G	V	G	V	E	T	R	L	M	G	A	.	A	T	A	S	S	P	S	P	Q	W	V	A	W	L	Q	S	Q	A	A	Q	V	A	G	V	N	Q	A	I	E	R	V	E	A	P	A	G	S	E	D	A	T	L	M	M	A	R	V	Q	Q	H	Q	G	Q	A	S	Y	V	V	F	G
Query Conservation																					.
Alig confidence																					.																										.	.	.																									.	.	.
Template Conservation																																															.	.	.																									.	.	.
Template Sequence		A	R	G	A	A	I	Q	T	G	C	D	Y	E	F	G	P	I	Q	N	G	V	N	E	F	I	K	T	P	K	L	D	D	L	F	A	K	Y	A	E	E	V	G	E	A	V	.	.	.	I	D	D	D	F	G	Y	G	S	T	D	T	G	N	V	S	H	V	V	P	T	I	H	P	.	.	.	H	I	K	I	G
Template Known Secondary structure										T								S	S			B																				T	T			B	.	.	.			S					B			T					T	T	T	S		B				.	.	.					S
Template Predicted Secondary structure																																															.	.	.																									.	.	.
Template SS confidence
		261	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.				.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.				330	.	.	.	.
		398	.	400	.	.	.	.	.	.	.	.							.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.
Predicted Secondary structure													.	.	.	.	.	.
Query SS confidence													.	.	.	.	.	.
Query Sequence		T	Q	L	A	A	G	H	H	N	E	K	.	.	.	.	.	.	F	D	F	D	E	Q	V	L	A	I	A	V	E	T	L	A	R	T	A	L	N	F	P	W	T	R	G	I
Query Conservation													.	.	.	.	.	.
Alig confidence								.					.	.	.	.	.	.
Template Conservation								.
Template Sequence		S	R	N	L	V	G	.	H	T	H	R	F	R	E	A	A	A	S	V	H	G	D	E	A	L	I	K	G	A	K	I	X	A	L	X	G	L	E	L	I	T	N	Q	D	V
Template Known Secondary structure			T	T			T	.	T	S								T	S
Template Predicted Secondary structure								.
Template SS confidence
		335	.	.	.	.	340		.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.