Job Description P77357 Confidence 100.00% Date Thu Jan 5 12:28:08 GMT 2012 Rank 37 Aligned Residues 323 % Identity 16% Template c3kl9F_ PDB info PDB header:hydrolase Chain: F: PDB Molecule:glutamyl aminopeptidase; PDBTitle: crystal structure of pepa from streptococcus pneumoniae Resolution 2.70 Å

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		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	S	H	W	R	R	D	F	H	H	Y	A	E	S	G	W	V	E	F	R	T	A	T	L	V	A	E	E	L	H	Q	L	G	Y	S	L	A	L	G	R	E	V	V	N	E	S	S	R	M	G	L	P	D	E	F	T	L	Q	R	E	F	E	R	A	R	Q	Q	G	A	L	A	Q	W	I	A	A	F	E	G	G
Query Conservation
Alig confidence																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	F	S	K	I	K	E	V	T	E	L	A	A	V	S	G	H	E	A	P	V	R	A	Y	L	R	E	K	L	T	P	H	V	D	E	V	V	T	D	G	L	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure											T	S			B	T	T														G	G	G		S						T	T	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.
		95	.	.	.	.	100	.	.	.	.	.	.	.	.		.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.
Predicted Secondary structure																.
Query SS confidence																.
Query Sequence		F	T	G	I	V	A	T	L	D	T	G	R	P	G	.	P	V	M	A	F	R	V	D	M	D	A	L	D	L	S	E	E	Q	D	V	S	H	R	P	Y	R	D	G	F	A	S	C	N	A	G	M	M	H	A	C	G	H	D	G	H	T	A	I	G	L	G	L	A	H	T	L	K	Q	F	E	S	G	L	H	G
Query Conservation																.
Alig confidence		.	.													.																						.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.																																			.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	G	I	F	G	I	K	H	S	E	A	V	D	A	P	R	V	L	V	A	S	H	M	D	E	V	G	F	M	V	S	E	I	K	P	.	.	.	.	.	.	.	D	G	T	F	R	V	V	E	I	G	G	W	N	P	M	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	S	S	Q
Template Known Secondary structure		.	.										S	T	T												B										T	.	.	.	.	.	.	.	T	S								S				G	G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		S	S
Template Predicted Secondary structure		.	.																																			.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
				46	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.								80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.																		.	.	.	.
		174	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	I	K	L	I	F	Q	P	A	E	E	G	T	R	G	A	R	A	M	V	D	A	G	V	V	D	D	V	D	Y	F	T	A	V	H	I	G	T	G	V	P	A	G	T	V	V	C	G	S	D	N	F	M	A	T	T	K	F	D	A	H	F	T	G	T	A	A	H	A	G	A	K	P	E	D	G	H	N	A	L
Query Conservation
Alig confidence																																									.	.	.	.	.	.	.	.
Template Conservation																																									.	.	.	.	.	.	.	.
Template Sequence		R	F	K	L	L	T	R	D	G	H	E	I	P	V	I	S	G	P	A	I	A	D	I	V	F	D	G	G	F	A	D	K	A	E	A	E	S	F	G	.	.	.	.	.	.	.	.	I	R	P	G	D	T	I	V	P	D	S	S	A	I	L	T	A	N	E	K	N	I	I	S	K	A	W	D	N	R	Y	G	V
Template Known Secondary structure								T	T	S											G	G	G	S							S	S							T	T	.	.	.	.	.	.	.	.			T	T													T	T	S	S					S
Template Predicted Secondary structure																																									.	.	.	.	.	.	.	.
Template SS confidence
		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.									.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.
		254	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.						.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.
Predicted Secondary structure																																.	.	.	.	.
Query SS confidence																																.	.	.	.	.
Query Sequence		L	A	A	A	Q	A	T	L	A	L	H	A	I	A	P	H	S	E	G	A	S	R	V	N	V	G	V	M	Q	A	.	.	.	.	.	G	S	G	R	N	V	V	P	A	S	A	L	L	K	V	E	T	R	G	A	S	D	V	I	N	Q	Y	V	F	D	R	A	Q	Q	A	I	Q	G	A	A	T	M	Y	G	V
Query Conservation																																.	.	.	.	.
Alig confidence																																.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	M	V	S	E	L	A	E	A	L	S	G	Q	K	L	G	N	E	L	Y	L	G	S	N	V	Q	E	E	V	G	L	R	G	A	H	T	S	T	T	K	F	D	P	E	V	F	L	A	V	D	C	S	P	A	G	D	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	G	G	Q	G	K	I	G	D
Template Known Secondary structure											T	S	S				S	S								S			T	T	T	S													S												G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	T		S			T	T	S
Template Predicted Secondary structure																																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		187	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.															.	.	.	.	.	.	250	.	.
		329	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	V	E	T	R	L	M	G	A	A	T	A	S	S	P	S	P	Q	W	V	A	W	L	Q	S	Q	A	A	Q	V	A	G	V	N	Q	A	I	E	R	V	E	A	P	A	G	S	E	D	A	T	L	M	M	A	R	V	Q	Q	H	Q	G	Q	A	S	Y	V	V	F	G	T	Q	L	A	A	G	H	H	N	E	K
Query Conservation
Alig confidence															.	.																	.	.	.	.																			.	.																		.	.	.
Template Conservation															.	.																	.	.	.	.																			.	.																		.	.	.
Template Sequence		G	T	L	I	R	F	Y	D	P	G	H	L	L	.	.	L	P	G	M	K	D	F	L	L	T	T	A	E	E	A	G	.	.	.	.	I	K	Y	Q	Y	Y	C	G	K	G	G	T	D	A	G	A	A	H	.	.	L	K	N	G	G	V	P	S	T	T	I	G	V	C	A	R	Y	.	.	.	I	H	S	H	Q
Template Known Secondary structure										T	T				.	.															T	T	.	.	.	.									S	S			T					T	.	.	T	S	T	T												B	T	.	.	.		S	S	S
Template Predicted Secondary structure															.	.																	.	.	.	.																			.	.																		.	.	.
Template SS confidence
		253	.	.	.	.	.	.	260	.	.	.	.	.			.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.					.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.			300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.				.	.	.	320	.
		409	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	D	F	D	E	Q	V	L	A	I	A	V	E	T	L	A	R	T	A	L	N	F	P	W	T	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	L	Y	A	M	D	D	F	L	E	A	Q	A	F	L	Q	A	L	V	K	K	L	D	R	S	T
Template Known Secondary structure																								S
Template Predicted Secondary structure
Template SS confidence
		322	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions