 |
Job Description | P77357 | Confidence | 50.21% | Date | Thu Jan 5 12:28:08 GMT 2012 |
Rank | 97 | Aligned Residues | 56 |
% Identity | 18% | Template | c3chgB_ |
PDB info |
PDB header:ligand binding protein | Chain: B: PDB Molecule:glycine betaine-binding protein; |
PDBTitle: the compatible solute-binding protein opuac from bacillus2 subtilis in complex with dmsa
|
Resolution | 2.80 Å |
|
 |
  |   |
2 | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | |
|
|
|
|
|
|
. | . | . | . | . | . | . | 30 | . | . | . | . | . | |
. | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . |  |  |
|
|
|
|
|
|  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
E | S | L | N | Q | F | V | N | S | L | A | P | K | L | S | H | W | R | R | D | F | . |
. |
. |
. |
. |
. |
. |
H | H | Y | A | E | S | G | W | V | E | F | R | T | . |
A | T | L | V | A | E | E | L | H | Q | L | G | Y | S | L | A | L | G | R | E | V | V |
Query Conservation |   |
  |   |
|   |   |   |
|   |   |   |   |   |   |
|   |   |   |   |   |   |
| . | . | . | . | . | . | . |   |   |   |
|
|   |
|   |   |
|   |   |   | . |
|   |   |
|   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |
|   |   |
|
|   |   |
|   |
|   |
|   |   |
|
|   |
|
|   |   |   |   |
|   |   |
|   |   |
|   |   |   |
|   |   |   |   |   |   |
|   |
|   |   |   |
|
|
|   |
|
|
|   |
|
|   |   |   |   |   |   |
Template Sequence |   |
K | V | A | A | E | Y | V | N | K | H | K | D | Q | I | A | E | W | T | K | G | V | Q | K | V | K | G | D | K | I | N | L | A | Y | V | A | W | D | S | E | I | A | S | T | N | V | I | G | K | V | L | E | D | L | G | Y | E | V | T | L | T | Q | V | E | A |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  | T | T | T |
|
|
|
| S | S |
|  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | T |
|  |  |  |  |  |  |
|
| T |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
143 | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|