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Job DescriptionP77357
Confidence100.00%DateThu Jan 5 12:28:08 GMT 2012
Rank5Aligned Residues401
% Identity13%Templatec2zogA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:cytosolic non-specific dipeptidase; PDBTitle: crystal structure of mouse carnosinase cn2 complexed with zn and2 bestatin
Resolution1.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20......... 30.........40.........50.........60.........70....
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Query Sequence  MESLNQFVNSLAPKLSHWRRDFHHYAESG. . . . . . WVEFRTATLVAEELHQLGYSLALGREVVNESSRMGLPDEFTLQRE
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Template Sequence  LKAVFQYIDENQDRYVKKLAEWVAIQSVSAWPEKRGEIRRMMEVAAADVQRLGGSVELVDIGKQKLPD. . . . . . . . . . . .
Template Known Secondary structure  TS

BTT
GGGTT




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   4.....10.........20.........30.........40.........50.........60.........70.
 
   75....80.........90.........100.........110.........120.........130.........140.........150....
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Query Sequence  FERARQQGALAQWIAAFEGGFTGIVATLDTGRPGPVMAFRVDMDALDLSEEQDVSHRPYRDGFASCNAGMMHACGHDGHT
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Template Sequence  . . . . . . . . . . . . . . GSEIPLPPILLGKLGSDPQKKTVCIYGHLDVQPAALEDGWDSEPFTLVEREGKLYGRGSTDDKGPV
Template Known Secondary structure  ..............S






TTS


B



GGGT
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TTS
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   72.......80.........90.........100.........110.........120.........130.......
 
   155....160.........170.........180.........190..... ....200.........210.........220.........230
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Query Sequence  AIGLGLAHTLKQFESGLHGVIKLIFQPAEEGTRGARAMVDA. . . . GVVDDVDYFTAVHIGTGVPAGTVVCGSDNFMATTK
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Template Sequence  AGWMNALEAYQKTGQEIPVNLRFCLEGMEESGSEGLDELIFAQKDKFFKDVDYVCISDNYWLGKNKPCITYGLRGICYFF
Template Known Secondary structure  TT


SSS
GGGT
TTTTTTTTTT




B
SSSSS

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   138.140.........150.........160.........170.........180.........190.........200.........210.......
 
   231........240.........250.........260.........270...
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Query Sequence  FDAHFTGTAAHAGAKPEDGHNALLAAAQATLALHAIAPHSEGA. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  IEVECSDKDLHSGVYGGSVHEAMTDLISLMGCLVDKKGKILIPGINDAVAPVTDEEHALYDHIDFDMEEFAKDVGAETLL
Template Known Secondary structure 

SS
TTTS

TTSB
TTS
B
STTTTTTS



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   218.220.........230.........240.........250.........260.........270.........280.........290.......
 
   274.....280.... .....290.........300.........310.........320..... ....330.
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Query Sequence  . . . . . . . . . . . . . . SRVNVGVMQAG. . . . SGRNVVPASALLKVETRGASDVINQYVFDRAQQAIQGAATM. . . . YGVGVE
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Template Sequence  HSCKKDILMHRWRYPSLSLHGIEGAFSGSGAKTVIPRKVVGKFSIRLVPDMIPEVVSEQVSSYLSKKFAELQSPNKFKVY
Template Known Secondary structure 
SSTS
SS

SSS



S
TT

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S
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   298.300.........310.........320.........330.........340.........350.........360.........370.......
 
   332.......340.........350.........360.........370.........380.........390.........400. ........410
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Query Sequence  TRLMGAATASSPSPQWVAWLQSQAAQVAGVNQAIERVEAPAGSEDATLMMARVQQHQGQASYVVFGTQLA. AGHHNEKFD
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Template Sequence  MGHGGKPWVSDFNHPHYQAGRRALKTVFGVEPDLTREG. . GSIPVTLTFQEA. . . . . TGKNVMLLPVGSADDGAHSQNEK
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TTSSS

S..S

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   378.380.........390.........400.........410..... ....420....... ..430.........440.........450
 
   411........420.........430....
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Query Sequence  FDEQVLAIAVETLARTALNFPWTR
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Template Conservation 
 
  
     

  

  
    
Template Sequence  LNRLNYIEGTKMLAAYLYEVSQLK
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   451........460.........470....
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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