Job Description P77357 Confidence 100.00% Date Thu Jan 5 12:28:08 GMT 2012 Rank 17 Aligned Residues 346 % Identity 18% Template c2rb7A_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:peptidase, m20/m25/m40 family; PDBTitle: crystal structure of co-catalytic metallopeptidase (yp_387682.1) from2 desulfovibrio desulfuricans g20 at 1.60 a resolution Resolution 1.60 Å

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		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30				.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
Predicted Secondary structure																						.	.	.
Query SS confidence																						.	.	.
Query Sequence		L	A	P	K	L	S	H	W	R	R	D	F	H	H	Y	A	E	S	G	W	.	.	.	V	E	F	R	T	A	T	L	V	A	E	E	L	H	Q	L	G	Y	S	L	A	L	G	R	E	V	V	N	E	S	S	R	M	G	L	P	D	E	F	T	L	Q	R	E	F	E	R	A	R	Q	Q	G	A	L	A	Q	W
Query Conservation																						.	.	.
Alig confidence																						.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	X	Q	H	I	V	E	L	T	S	D	L	I	R	F	P	S	X	H	S	R	P	E	Q	I	S	R	C	A	G	F	I	X	D	W	C	A	Q	N	G	I	H	A	E	R	X	D	H	D	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure															T	S				T	T																			T	T									T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.						.	160	.	.
Predicted Secondary structure																																																																									.	.	.	.	.
Query SS confidence																																																																									.	.	.	.	.
Query Sequence		I	A	A	F	E	G	G	F	T	G	I	V	A	T	L	D	T	G	R	P	G	P	V	M	A	F	R	V	D	M	D	A	L	D	L	S	E	E	Q	D	V	S	H	R	P	Y	R	D	G	F	A	S	C	N	A	G	M	M	H	A	C	G	H	D	G	H	T	A	I	G	L	.	.	.	.	.	G	L	A	H
Query Conservation																																																																									.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.																																.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	I	P	S	V	X	V	L	P	E	K	G	R	A	G	L	L	L	X	A	H	I	D	V	V	D	.	.	.	.	.	.	A	E	D	D	L	F	V	P	R	V	E	N	D	R	L	Y	G	R	G	A	N	D	D	K	Y	A	V	A	L	G	L	V	X	F	R	D	R	L	N	A
Template Known Secondary structure		.	.	.	.	.	.	.	.	.								S	B	T	T															.	.	.	.	.	.			G	G	G	G	S					T	T				S	T	T	T	T	T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.
Template SS confidence
											53	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.							.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	L	K	Q	F	E	S	G	L	H	G	V	I	K	L	I	F	Q	P	A	E	E	G	T	R	G	A	R	A	M	V	D	A	G	V	V	D	D	V	D	Y	F	T	A	V	H	I	G	T	G	V	P	A	G	T	V	V	C	G	S	D	N	F	M	A	T	T	K	F	D	A	H	F	T	G	T	A	A	H	A
Query Conservation
Alig confidence																																													.	.	.	.	.	.	.
Template Conservation																																													.	.	.	.	.	.	.
Template Sequence		L	K	A	A	G	R	S	Q	K	D	X	A	L	G	L	L	I	T	G	D	E	E	I	G	G	X	N	G	A	A	K	A	L	P	L	I	R	A	D	Y	V	V	A	.	.	.	.	.	.	.	L	D	G	G	N	P	Q	Q	V	I	T	K	E	K	G	I	I	D	I	K	L	T	C	T	G	K	A	A	H	G
Template Known Secondary structure					T	T			G	G	G									S		G	G	G	T	S	T	T	T					G	G	G									.	.	.	.	.	.	.		S	S	S	B	T	T																			B				T
Template Predicted Secondary structure																																													.	.	.	.	.	.	.
Template SS confidence
		118	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160								.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190
		243	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.				.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																										.	.	.
Query SS confidence																										.	.	.
Query Sequence		G	A	K	P	E	D	G	H	N	A	L	L	A	A	A	Q	A	T	L	A	L	H	A	I	.	.	.	A	P	H	S	E	G	A	S	R	V	N	V	G	V	M	Q	A	G	S	G	R	N	V	V	P	A	S	A	L	L	K	V	E	T	R	G	A	S	D	V	I	N	Q	Y	V	F	D	R	A	Q	Q	A	I
Query Conservation																										.	.	.
Alig confidence		.																								.	.	.
Template Conservation		.
Template Sequence		.	A	R	P	W	X	G	V	N	A	V	D	L	L	X	E	D	Y	T	R	L	K	T	L	F	A	E	E	N	E	D	H	W	H	R	T	V	N	L	G	R	I	R	A	G	E	S	T	N	K	V	P	D	V	A	E	G	W	F	N	I	R	V	T	E	H	D	D	P	G	A	L	I	D	K	I	R	K	T	V
Template Known Secondary structure		.	T	S	G	G	G	S	B															T	T	S					T	T			S												S		T	T				S												T	T	S
Template Predicted Secondary structure		.
Template SS confidence
			191	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.
		320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	G	A	A	T	M	Y	G	V	G	V	E	T	R	L	M	G	A	A	T	A	S	S	P	S	P	Q	W	V	A	W	L	Q	S	Q	A	A	Q	V	A	G	V	N	Q	A	I	E	R	V	E	A	P	A	G	S	E	D	A	T	L	M	M	A	R	V	Q	Q	H	Q	G	Q	A	S	Y	V	V	F	G	T	Q
Query Conservation
Alig confidence				.	.	.	.	.	.	.	.																																	.	.	.	.	.	.	.	.	.											.	.	.	.								.	.
Template Conservation				.	.	.	.	.	.	.	.																																	.	.	.	.	.	.	.	.	.											.	.	.	.								.	.
Template Sequence		S	G	.	.	.	.	.	.	.	.	T	V	S	I	V	R	T	V	P	V	F	L	A	A	D	S	P	Y	T	E	R	L	L	A	L	S	G	A	T	A	G	K	.	.	.	.	.	.	.	.	.	A	H	G	A	S	D	A	R	Y	L	.	.	.	.	G	E	N	G	L	T	G	.	.	V	V	W	G	A	E
Template Known Secondary structure		S	S	.	.	.	.	.	.	.	.																																	.	.	.	.	.	.	.	.	.		S	S			G	G	G	G	T	.	.	.	.	G	G	G	T				.	.
Template Predicted Secondary structure				.	.	.	.	.	.	.	.																																	.	.	.	.	.	.	.	.	.											.	.	.	.								.	.
Template SS confidence
		270	.									.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.										.	.	.	.	.	.	310	.	.	.					.	.	.	.	.	.	320			.	.	.	.	.	.
		400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	A	A	G	H	H	N	E	K	F	D	F	D	E	Q	V	L	A	I	A	V	E	T	L	A	R	T	A	L	N	F	P	W
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	F	N	T	L	H	S	R	D	E	C	L	H	I	P	S	L	Q	S	I	Y	D	P	L	X	Q	L	A	R	E	X	E	E
Template Known Secondary structure			T	T		T	T	S	T	T					T	T
Template Predicted Secondary structure
Template SS confidence
		327	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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