Job Description P77357 Confidence 100.00% Date Thu Jan 5 12:28:08 GMT 2012 Rank 8 Aligned Residues 363 % Identity 23% Template c2q43A_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:iaa-amino acid hydrolase ilr1-like 2; PDBTitle: ensemble refinement of the protein crystal structure of iaa-aminoacid2 hydrolase from arabidopsis thaliana gene at5g56660 Resolution 2.00 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	Q	F	V	N	S	L	A	P	K	L	S	H	W	R	R	D	F	H	H	Y	A	E	S	G	W	V	E	F	R	T	A	T	L	V	A	E	E	L	H	Q	L	G	Y	S	L	A	L	G	R	E	V	V	N	E	S	S	R	M	G	L	P	D	E	F	T	L	Q	R	E	F	E	R	A	R	Q	Q	G	A	L
Query Conservation
Alig confidence																																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		F	A	K	S	P	E	V	F	D	W	M	V	K	I	R	R	K	I	H	E	N	P	E	L	G	Y	E	E	L	E	T	S	K	L	I	R	S	E	L	E	L	I	G	I	K	Y	R	Y	P	V	A	I	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure					S																	S				T	T																	T								T	T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	Q	W	I	A	A	F	E	G	G	F	T	G	I	V	A	T	L	D	T	G	R	P	G	P	V	M	A	F	R	V	D	M	D	A	L	D	L	S	E	E	Q	D	V	S	H	R	P	Y	R	D	G	F	A	S	C	N	A	G	M	M	H	A	C	G	H	D	G	H	T	A	I	G	L	G	L	A	H	T	L
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.										.																			.	.	.											.									.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.										.																			.	.	.											.									.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	G	V	I	G	Y	I	G	T	G	.	E	P	P	F	V	A	L	R	A	D	M	D	A	L	P	I	Q	E	.	.	.	G	V	E	W	E	H	K	S	K	I	.	A	G	K	M	H	A	C	G	.	.	.	H	D	G	H	V	T	M	L	L	G	A	A	K	I	L
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.								S	S	.	S	S												B	S				.	.	.				S	T	T	S		S	S	.	T	T		B		T	T	S	.	.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.										.																			.	.	.											.									.	.	.
Template SS confidence
														73	.	.	.	.	.	.	80	.		.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.				100	.	.	.	.	.	.	.	.	.		110	.	.	.	.	.	.	.				.	.	120	.	.	.	.	.	.	.	.	.	130	.	.
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	Q	F	E	S	G	L	H	G	V	I	K	L	I	F	Q	P	A	E	E	G	T	R	G	A	R	A	M	V	D	A	G	V	V	D	D	V	D	Y	F	T	A	V	H	I	G	T	G	V	P	A	G	T	V	V	C	G	S	D	N	F	M	A	T	T	K	F	D	A	H	F	T	G	T	A	A	H	A	G	A
Query Conservation
Alig confidence																																																												.	.	.	.	.	.	.	.													.
Template Conservation																																																												.	.	.	.	.	.	.	.													.
Template Sequence		H	E	H	R	H	H	L	Q	G	T	V	V	L	I	F	Q	P	A	E	E	G	L	S	G	A	K	K	M	R	E	E	G	A	L	K	N	V	E	A	I	F	G	I	H	L	S	A	R	I	P	F	G	K	A	A	S	R	A	.	.	.	.	.	.	.	.	G	S	F	L	A	G	A	G	V	F	E	A	.	V
Template Known Secondary structure				T	G	G	G		S	S										T	T	T	T									T	T	T	T	T	T															T	T						S	.	.	.	.	.	.	.	.							B						.
Template Predicted Secondary structure																																																												.	.	.	.	.	.	.	.													.
Template SS confidence
		133	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190									.	.	.	.	.	.	.	.	.	200	.	.		.
		245	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.			.	310	.	.	.	.	.	.	.	.	.	320	.	.
Predicted Secondary structure																																																																		.	.
Query SS confidence																																																																		.	.
Query Sequence		K	P	E	D	G	H	N	A	L	L	A	A	A	Q	A	T	L	A	L	H	A	I	A	P	H	S	E	G	A	S	R	V	N	V	G	V	M	Q	A	G	S	G	R	N	V	V	P	A	S	A	L	L	K	V	E	T	R	G	A	S	D	V	I	N	.	.	Q	Y	V	F	D	R	A	Q	Q	A	I	Q	G	A
Query Conservation																																																																		.	.
Alig confidence																																							.	.	.	.	.																							.	.
Template Conservation																																							.	.	.	.	.
Template Sequence		I	T	G	K	T	I	D	P	V	V	A	A	S	S	I	V	L	S	L	Q	Q	L	V	S	R	E	T	D	P	L	D	S	K	V	V	T	V	.	.	.	.	.	S	K	V	N	P	D	S	I	T	I	G	G	T	L	R	A	F	T	G	F	T	Q	L	Q	Q	R	V	K	E	V	I	T	K	Q	A	A	V	H
Template Known Secondary structure																									B			S	S	T	T	S							.	.	.	.	.																	S	S																			T	T
Template Predicted Secondary structure																																							.	.	.	.	.
Template SS confidence
		204	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240						.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.
		323	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.
Predicted Secondary structure																																																																																	.
Query SS confidence																																																																																	.
Query Sequence		A	T	M	Y	G	V	G	V	E	T	R	L	M	G	A	A	T	A	S	S	P	S	P	Q	W	V	A	W	L	Q	S	Q	A	A	Q	V	A	G	V	N	Q	A	I	E	R	V	E	A	P	A	G	S	E	D	A	T	L	M	M	A	R	V	Q	Q	H	Q	G	Q	A	S	Y	V	V	F	G	T	Q	L	A	.
Query Conservation																																																																																	.
Alig confidence																																												.																			.	.	.	.	.														.
Template Conservation																																												.																			.	.	.	.	.
Template Sequence		R	C	N	A	S	V	N	L	T	P	N	G	R	E	P	M	P	P	T	V	N	N	K	D	L	Y	K	Q	F	K	K	V	V	R	D	L	L	G	Q	E	A	F	.	V	E	A	A	P	V	M	G	S	E	D	F	S	Y	F	A	E	T	.	.	.	.	.	I	P	G	H	F	S	L	L	G	M	Q	D	E	T
Template Known Secondary structure		T							S	S	G	G	G				B																					T		T	T	T		.						B					T	T					T	T	.	.	.	.	.	T	T											T	T
Template Predicted Secondary structure																																												.																			.	.	.	.	.
Template SS confidence
		296	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.		.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.						.	.	.	.	360	.	.	.	.	.	.	.	.	.
					402	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.
Predicted Secondary structure		.	.	.
Query SS confidence		.	.	.
Query Sequence		.	.	.	A	G	H	H	N	E	K	F	D	F	D	E	Q	V	L	A	I	A	V	E	T	L	A	R	T	A	L	N	F	P	W	T	R
Query Conservation		.	.	.
Alig confidence		.	.	.
Template Conservation
Template Sequence		N	G	Y	A	S	S	H	S	P	L	Y	R	I	N	E	D	V	L	P	Y	G	A	A	I	H	A	S	M	A	V	Q	Y	L	K	E	K
Template Known Secondary structure				S			S	S	S	T	T					G	G	G
Template Predicted Secondary structure
Template SS confidence
		370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.