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Job DescriptionP77357
Confidence100.00%DateThu Jan 5 12:28:08 GMT 2012
Rank39Aligned Residues319
% Identity11%Templatec2pe3A_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:354aa long hypothetical operon protein frv; PDBTitle: crystal structure of frv operon protein frvx (ph1821)from pyrococcus2 horikoshii ot3
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   16...20.........30 .........40.........50.........60.........70.........80.........90....
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Query Sequence  SHWRRDFHHYAESGW. VEFRTATLVAEELHQLGYSLALGREVVNESSRMGLPDEFTLQREFERARQQGALAQWIAAFEGG
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Template Sequence  WKLMQEIIEAPGVSGYEHLGIRDIVVDVLKEVADEVKVDKLG. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure  S

BTT
GGGTTT
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Query Sequence  FTGIVATLDTGRPGPVMAFRVDMDALDLSEEQDVSHRPYRDGFASCNAGMM. . HACGHDGHTAIGLGLAHTLKQFESGLH
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Template Sequence  . . NVIAHFKGS. . SPRIMVAAHMDKIGVM. . . . . . . . . VNHIDKDGYLHIVPIGGVLPETLVAQRIRFFT. . . . EKGERY
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   54.....60.. .......70........ .80.........90.........100.........110 ......
 
   173......180.........190.........200.........210.........220.........230.........240.........250..
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Query Sequence  GVIKLIFQPAEEGTRGARAMVDAGVVDDVDYFTAVHIGTGVPAGTVVCGSDNFMATTKFDAHFTGTAAHAGAKPEDGHNA
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Template Sequence  GVVGVLPDWDQIVVDVGASSKEEAEEMG. . . . . . . . . . . . . . . . . . . . FRVGTVGEFAPNFTRLNEHRFA. TPYLDDRIC
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   117..120.........130.........140.... .....150.........160...... ...170.....
 
   253......260.........270.........280.. .......290.........300.........310.........320.........
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Query Sequence  LLAAAQATLALHAIAPHSEGASRVNVGVMQ. . . AGSGRNVVPASALLKVETRGASDVINQYVFDRAQQAIQGAATMYGVG
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Template Sequence  LYAMIEAARQLGDHEADIYIVGSVQEEVGLRGARVASYAINPEVGIAMDVTFAKQPHDKGKIVPELGK. . . . . . . . . . . .
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   190.........200.........210.........220.........230.........240.........250.......
 
   330.........340.........350.........360.........370.........380.........390.........400.........
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Query Sequence  VETRLMGAATASSPSPQWVAWLQSQAAQVAGVNQAIERVEAPAGSEDATLMMARVQQHQGQASYVVFGTQLAAGHHNEKF
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Template Sequence  . . . . GPVMDVGPNINPKLRAFADEVAKKYEIP. . LQVEPSPRPTGTDANVMQ. . INREGVATAVLSIPIRY. . . MHSQVE
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   258.260.........270.........280..... ....290.........300... ......310.........320 ......
 
   410.........420.........430...
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Query Sequence  DFDEQVLAIAVETLARTALNFPWT
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Template Sequence  LADARDVDNTIKLAKALLEELKPM
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   327..330.........340.........350
 
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No model constructed - rank, confidence too low




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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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