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Job DescriptionP77357
Confidence99.89%DateThu Jan 5 12:28:08 GMT 2012
Rank53Aligned Residues236
% Identity15%Templatec2greC_
PDB info PDB header:hydrolaseChain: C: PDB Molecule:deblocking aminopeptidase; PDBTitle: crystal structure of deblocking aminopeptidase from bacillus cereus
Resolution2.65 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   11........20.........30.........40.........50.........60.........70.........80.........90
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Query Sequence  LAPKLSHWRRDFHHYAESGWVEFRTATLVAEELHQLGYSLALGREVVNESSRMGLPDEFTLQREFERARQQGALAQWIAA
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Template Sequence  HTKETXELIKELVSIPSPSGNTAKIINFIENYVSEWNVETKRNNKG. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure  TS

BTT

TSSSSS
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   4.....10.........20.........30.........40.........
 
   91........100.........110.........120.
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Query Sequence  FEGGFTGIVATLDTGRPGPVMAFRVDMDALD. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  . . . . . . ALILTVKGKNDAQHRLLTAHVDTLGAXVKEIKPDGRLSLSXIGGFRWNSVEGEYCEIETSSGKTYTGTILXIEV
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S

B

TTS
SS

GGGGTT

TTS


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   50.........60.........70.........80.........90.........100.........110.........120...
 
   122.......130.........140.........150.........160.........170.........180.....
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Query Sequence  . . . . . . . . . . . . . . . . LSEEQDVSHRPYRDGFASCNAGMMHACGHDGHTAIGLGLAHTLKQFESGLHGVIKLIFQPAEEG
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Template Sequence  RIDERVFSADEVRELGIEVGDFVSFDPRVQITESGYIKSR. HLDDKVSVAILLKLIKRLQDENVTLPYTTHFLISNNENI
Template Known Secondary structure  SS


STT

TT





TTSS.

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SS



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   144.....150.........160.........170.........180... ......190.........200.........210.........220..
 
   186...190.........200.........210.........220.........230.........240.........250.........260.....
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Query Sequence  TRGARAMVDAGVVDDVDYFTAVHIGTGVPAGTVVCGSDNFMATTKFDAHFTGTAAHAGAKPEDGHNALLAAAQATLALHA
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Template Conservation 
  

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Template Sequence  PEETVE. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure 
TT..........................................................................
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   231.....
 
   266...270.........280.........290.........300.........310.........320.........330.........340.....
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Query Sequence  IAPHSEGASRVNVGVMQAGSGRNVVPASALLKVETRGASDVINQYVFDRAQQAIQGAATMYGVGVETRLMGAATASSPSP
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . YLAVDXGALGDG. . . . . . . . . . . . . . . . . . SDEYTVSICAKDSSGPY. . HY
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S

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TTSTT
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   237..240........ .250.........260..... ..
 
   346...350.........360.........370.........380.........390.........400.........410.........420.....
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Query Sequence  QWVAWLQSQAAQVAGVNQAIERVEAPAGSEDATLMMARVQQHQGQASYVVFGTQLAAGHHNEKFDFDEQVLAIAVETLAR
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Template Sequence  ALRKHLVELAKTNHIEYKVDIYPYYRAGF. . . . . . . . . . . . . DVKHALIGAGIDS. . . SHAF. ERTHESSIAHTEALVYA
Template Known Secondary structure  TT

TT


SS.............SS

SS...
SSS.
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   270.........280.........290........ .300.........310. .... ....320.........330..
 
   426.
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Query Sequence  TA
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Template Conservation   
Template Sequence  YV
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   341.
 
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No model constructed - rank, confidence too low




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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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