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Job DescriptionP77357
Confidence100.00%DateThu Jan 5 12:28:08 GMT 2012
Rank33Aligned Residues330
% Identity15%Templatec1yloA_
PDB info PDB header:structural genomics, unknown functionChain: A: PDB Molecule:hypothetical protein sf2450; PDBTitle: crystal structure of protein of unknown function (possible2 aminopeptidase) s2589 from shigella flexneri 2a str. 2457t
Resolution2.15 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   16...20.........30.........40.........50.........60.........70.........80.........90.....
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Query Sequence  SHWRRDFHHYAESGWVEFRTATLVAEELHQLGYSLALGREVVNESSRMGLPDEFTLQREFERARQQGALAQWIAAFEGGF
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Template Sequence  LSLLKALSEADAIASSEQEVRQILLEEAARLQKEVRFDGLG. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure  S

BTTB
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   96...100.........110.........120.........130.........140.........150.........160.........170.....
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Query Sequence  TGIVATLDTGRPGPVMAFRVDMDALDLSEEQDVSHRPYRDGFASCNAGMMHACGHDGHTAIGLGLAHTLKQFESGLHGVI
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Template Sequence  . SVLIRLNE. STGPKVXICAHXDEVGF. . . . . . . . . . . . . XVRSISREGAIDVLPVGNVRXAARQLQPVRITTRE. ECKI
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   44.....50. ........60........ .70.........80.........90.........100... ....
 
   176...180.........190.........200.........210.........220.........230.........240.........250.....
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Query Sequence  KLIFQPAEEGTRGARAMVDAGVVDDVDYFTAVHIGTGVPAGTVVCGSDNFMATTKFDAHFTGTAAHAGAKPEDGHNALLA
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Template Sequence  PGLLDGDRQGNDVSAXRVDIGART. . . . . . . . . . . . . YDEVXQAGIRPGDRVTFDTTFQVLPHQRVX. GKAFDDRLSCYL
Template Known Secondary structure  TT
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   108.110.........120.........130. ........140.........150.........160. ........170...
 
   256...260.........270........ .280.........290.........300.........310.........320.........330.
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Query Sequence  AAQATLALHAIAPHSEGASRVNV. . . . GVMQAGSGRNVVPASALLKVETRGASDVINQYVFDRAQQAIQGAATMYGVGVE
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Template Sequence  LVTLLRELHDAELPAEVWLVASSSEEVGLRGGQTATRAVSPDVAIVLDTACWAKN. . . . . . . . . FDYGAANHRQIGNGPX
Template Known Secondary structure  TT


SSS

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SST.........T

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   174.....180.........190.........200.........210.........220........ .230.........240....
 
   332.......340.........350.........360.........370.........380.........390.........400.........410.
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Query Sequence  TRLMGAATASSPSPQWVAWLQSQAAQVAGVNQAIERVEAPAGSEDATLMMARVQQHQGQASYVVFGTQLAAGHHNEKFDF
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Template Sequence  LVLSDKSLIA. . PPKLTAWIETVAAEIGVPLQADXF. . . SNGGTDGGAVH. . LTGTGVPTLVXGPATRH. . . GHCAASIA
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   245....250.... .....260.........270........ .280......... 290.........300...... ...310....
 
   412.......420.........430...
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Query Sequence  DEQVLAIAVETLARTALNFPWT
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Template Sequence  DCRDILQXEQLLSALIQRLTRE
Template Known Secondary structure  T

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   315....320.........330......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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