Job Description P77357 Confidence 97.85% Date Thu Jan 5 12:28:08 GMT 2012 Rank 78 Aligned Residues 97 % Identity 18% Template c1cx8F_ PDB info PDB header:metal transport Chain: F: PDB Molecule:transferrin receptor protein; PDBTitle: crytal structure of the ectodomain of human transferrin receptor Resolution 3.20 Å

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		97	.	.	100	.	.	.	.		.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.					.	.	170	.
Predicted Secondary structure										.																																																																.	.	.	.
Query SS confidence										.																																																																.	.	.	.
Query Sequence		G	I	V	A	T	L	D	T	.	G	R	P	G	P	V	M	A	F	R	V	D	M	D	A	L	D	L	S	E	E	Q	D	V	S	H	R	P	Y	R	D	G	F	A	S	C	N	A	G	M	M	H	A	C	G	H	D	G	H	T	A	I	G	L	G	L	A	H	T	L	K	Q	F	.	.	.	.	E	S	G	L
Query Conservation										.																																																																.	.	.	.
Alig confidence										.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.
Template Conservation																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		N	I	F	G	V	I	K	G	F	V	E	P	D	H	Y	V	V	V	G	A	Q	R	D	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	W	G	P	G	A	A	K	S	G	V	G	T	A	L	L	L	K	L	A	Q	M	F	S	D	M	V	L	K	D	G	F	Q	P
Template Known Secondary structure										S	S															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S			T	T	T	T																				T	S
Template Predicted Secondary structure																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		388	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.																								.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.
		172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.		.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.
Predicted Secondary structure																		.
Query SS confidence																		.
Query Sequence		H	G	V	I	K	L	I	F	Q	P	A	E	E	G	T	R	.	G	A	R	A	M	V	D	A	G	V	V	D	D	V	D	Y	F	T	A	V	H	I	G	T	G	V	P	A	G
Query Conservation																		.
Alig confidence																		.
Template Conservation
Template Sequence		S	R	S	I	I	F	A	S	W	S	A	G	D	F	G	S	V	G	A	T	E	W	L	E	G	Y	L	S	S	L	H	L	K	A	F	T	Y	I	N	L	D	K	A	V	L	G
Template Known Secondary structure		S							B			S	G	G	G	T	S								G	G	G	T	T	T												T	T		B	S
Template Predicted Secondary structure
Template SS confidence
		445	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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