Job Description P0A8Y1 Confidence 99.88% Date Thu Jan 5 11:08:57 GMT 2012 Rank 42 Aligned Residues 222 % Identity 15% Template d1vjra_ SCOP info HAD-like HAD-like NagD-like Resolution 2.40

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		1	.		.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.					20	.	.	.	.	.	.	.	.	.	30	.	.	.										.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.
Predicted Secondary structure				.																		.	.	.	.															.	.	.	.	.	.	.	.	.
Query SS confidence				.																		.	.	.	.															.	.	.	.	.	.	.	.	.
Query Sequence		M	K	.	W	D	W	I	F	F	D	A	D	E	T	L	F	T	F	D	S	.	.	.	.	F	T	G	L	Q	R	M	F	L	D	Y	S	V	T	.	.	.	.	.	.	.	.	.	F	T	A	E	D	F	Q	D	Y	Q	A	V	N	K	P	L	W	V	D	Y	Q	N	G	A	I	T	S	L	Q	L	Q	H	G
Query Conservation				.																		.	.	.	.															.	.	.	.	.	.	.	.	.
Alig confidence				.																		.	.	.	.															.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	D	K	I	E	L	F	I	L	D	X	D	G	T	F	Y	L	D	D	S	L	L	P	G	S	L	E	F	L	E	T	L	K	E	K	N	K	R	F	V	F	F	T	N	N	S	S	L	G	A	Q	D	Y	V	R	K	L	R	N	X	G	V	D	V	P	D	D	A	V	V	T	S	G	E	I	T	A	E	H	X
Template Known Secondary structure		G	G	G									B	T	T	T			T	T				T	T											T	T								S		T	T	S												T	T					G	G	G
Template Predicted Secondary structure
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		67	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.																.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.
Predicted Secondary structure																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	F	E	S	W	A	E	R	L	N	V	E	P	G	K	L	N	E	A	F	I	N	A	M	A	E	I	C	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	P	L	P	G	A	V	S	L	L	N	A	I	R	G	N	A	K	I	G	I	I	T	N	G	F	S	A	L	Q	Q	V	R	L	E	R	T
Query Conservation																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	K	R	F	G	R	C	R	I	F	L	L	G	T	P	Q	L	K	K	V	F	E	A	Y	G	H	V	I	D	E	E	N	P	D	F	V	V	L	G	F	D	K	T	L	T	Y	E	R	L	K	K	A	C	I	L	L	R	K	G	K	F	Y	I	A	T	H	P	D	I	N	C	P	S	K	E	G	P	V	P	D
Template Known Secondary structure							S							S											T	T					S	S	S		S								T	T														T	T	T						S				S					T	T	S
Template Predicted Secondary structure
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
		132	.				.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.
Predicted Secondary structure				.	.	.																																																																								.	.	.	.
Query SS confidence				.	.	.																																																																								.	.	.	.
Query Sequence		G	L	.	.	.	R	D	Y	F	D	L	L	V	I	S	E	E	V	G	V	A	K	P	N	K	K	I	F	D	Y	A	L	E	Q	A	G	N	P	D	R	S	R	V	L	M	V	G	D	T	A	E	S	D	I	L	G	G	I	N	A	G	L	A	T	C	W	L	N	A	H	H	R	E	Q	P	E	.	.	.	.
Query Conservation				.	.	.																																																																								.	.	.	.
Alig confidence				.	.	.																															.																																									.	.	.	.
Template Conservation																																					.
Template Sequence		A	G	S	I	X	A	A	I	E	A	S	T	G	R	K	P	D	L	I	A	G	K	P	N	P	L	V	V	D	V	I	S	E	K	F	.	G	V	P	K	E	R	X	A	X	V	G	D	R	L	Y	T	D	V	K	L	G	K	N	A	G	I	V	S	I	L	V	L	T	G	E	T	T	P	E	D	L	E	R	A
Template Known Secondary structure														S				S				S	T	T	S	T											.	T			G	G	G						S													T							S	S	S	S
Template Predicted Secondary structure																																					.
Template SS confidence
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.		.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
		205	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	I	A	P	T	W	T	V	S	S	L	H	E	L	E	Q	L	L	C
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	T	K	P	D	F	V	F	K	N	L	G	E	L	A	K	A	V	Q
Template Known Secondary structure		S	S			S				S	S
Template Predicted Secondary structure
Template SS confidence
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions