Job Description P0A8Y1 Confidence 93.42% Date Thu Jan 5 11:08:57 GMT 2012 Rank 140 Aligned Residues 105 % Identity 16% Template c3qleA_ PDB info PDB header:chaperone Chain: A: PDB Molecule:tim50p; PDBTitle: structural basis for the function of tim50 in the mitochondrial2 presequence translocase Resolution 1.83 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	W	I	F	F	D	A	D	E	T	L	F	T	F	D	S	F	T	G	L	Q	R	M	F	L	D	Y	S	V	T	F	T	A	E	D	F	Q	D	Y	Q	A	V	N	K	P	L	W	V	D	Y	Q	N	G	A	I	T	S	L	Q	L	Q	H	G	R	F	E	S	W	A	E	R	L	N	V	E	P	G	K	L	N
Query Conservation
Alig confidence																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	T	L	V	I	T	L	E	D	F	L	V	H	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure									B	T	T	T				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		192	.	.	.	.	.	.	.	200	.	.	.	.	.
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	A	F	I	N	A	M	A	E	I	C	T	P	L	P	G	A	V	S	L	L	N	A	I	R	G	N	A	K	I	G	I	I	T	N	G	F	S	A	L	Q	Q	V	R	L	E	R	T	G	L	R	D	Y	F	D	L	L	V	I	S	E	E	V	G	V	A	K	P	N	K	K	I	F	D	Y	A	L	E	Q	A
Query Conservation
Alig confidence		.																																																.	.
Template Conservation		.																																																.	.
Template Sequence		.	E	W	S	Q	K	H	G	W	R	T	A	K	R	P	G	A	D	Y	F	L	G	Y	L	S	Q	Y	Y	E	I	V	L	F	S	S	N	Y	M	M	Y	S	D	K	I	A	E	K	L	.	.	D	P	I	H	A	F	V	S	Y	N	L	F	K	E	H	C	V	Y	K	D	G	V	H	I	K	D	L	S	K	L
Template Known Secondary structure		.				T	T	T								T	T									T	T	T								S	S												T	.	.	S	T	T		S	S							G	G	G	S				T	T						G	G	G	S
Template Predicted Secondary structure		.																																																.	.
Template SS confidence
			206	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.			.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	N	P	D	R	S	R	V	L	M	V	G	D	T	A
Query Conservation
Alig confidence		.
Template Conservation		.
Template Sequence		.	N	R	D	L	S	K	V	I	I	I	D	T	D	P
Template Known Secondary structure		.		S		G	G	G						S		T
Template Predicted Secondary structure		.
Template SS confidence
			283	.	.	.	.	.	.	290	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions