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Job DescriptionP0A8Y1
Confidence98.38%DateThu Jan 5 11:08:57 GMT 2012
Rank97Aligned Residues143
% Identity13%Templatec3ewiB_
PDB info PDB header:transferaseChain: B: PDB Molecule:n-acylneuraminate cytidylyltransferase; PDBTitle: structural analysis of the c-terminal domain of murine cmp-2 sialic acid synthetase
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60.........70.........80.
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Query Sequence  KWDWIFFDADETLFTFDSFTGLQRMFLDYSVTFTAEDFQDYQAVNKPLWVDYQNGAITSLQLQHGRFESWAERLNVEPGK
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Template Sequence  EIKLLVCNIDGCLTNG. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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   8.10.........20...
 
   82.......90.........100... ......110.........120.........130.........140.........150.........160
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Query Sequence  LNEAFINAMAEICTPLPGAVSL. LNAIRGNAKIGIITNGFSALQQVRLERTGLRDYFDLLVISEEVGVAKPNKKIFDYAL
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Template Sequence  . . HIYVSGDQKEIISYDVKDAIGISLLKKSGIEVRLISERACSKQTLSALKLDCKTEVS. . . . . . . . . VSDKLATVDEWR
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   24.....30.........40.........50.........60.........70.........80 .........90..
 
   161........170.........180.........190.........200.........210.... .....220....
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Query Sequence  EQAGNPDRSRVLMVGDTAESDILGGINAGLATCWLNAHHREQPEGIAPTWTVSS. . . . . . LHELEQLLCK
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Template Sequence  KEMGL. CWKEVAYLGNEV. SDEECLKRVG. . . LSAVPADACSGAQKAVGYICKCSGGRGAIREFAEHIFL
Template Known Secondary structure  TT
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   93.... ..100......... 110......... 120.........130.........140.........150.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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