Job Description P0A8Y1 Confidence 99.25% Date Thu Jan 5 11:08:57 GMT 2012 Rank 80 Aligned Residues 184 % Identity 12% Template c2i7dB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:5'(3')-deoxyribonucleotidase, cytosolic type; PDBTitle: structure of human cytosolic deoxyribonucleotidase in2 complex with deoxyuridine, alf4 and mg2+ Resolution 1.20 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.			.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure																							.	.
Query SS confidence																							.	.
Query Sequence		M	K	W	D	W	I	F	F	D	A	D	E	T	L	F	T	F	D	S	F	T	.	.	G	L	Q	R	M	F	L	D	Y	S	V	T	F	T	A	E	D	F	Q	D	Y	Q	A	V	N	K	P	L	W	V	D	Y	Q	N	G	A	I	T	S	L	Q	L	Q	H	G	R	F	E	S	W	A	E	R	L	N	V	E
Query Conservation																							.	.
Alig confidence				.	.	.																	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation				.	.	.																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	R	.	.	.	V	L	V	D	M	D	G	V	L	A	D	F	E	A	G	L	L	R	G	F	R	R	R	F	P	E	E	P	H	V	P	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	Q	R	R	G	F	L	A	R	E	Q	Y	R	A	L	R	P	D	L
Template Known Secondary structure				.	.	.					S	B	T	T	T	B														S	T	T	S					G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G			S	S											T	T
Template Predicted Secondary structure				.	.	.																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		5	.				.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.																									.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.
		79	80	.	.	.	.	.	.	.	.	.		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.			110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
Predicted Secondary structure													.																					.	.
Query SS confidence													.																					.	.
Query Sequence		P	G	K	L	N	E	A	F	I	N	A	.	M	A	E	I	C	T	P	L	P	G	A	V	S	L	L	N	A	I	R	G	.	.	N	A	K	I	G	I	I	T	N	G	F	S	A	L	Q	Q	V	R	L	E	R	T	G	L	R	D	Y	F	D	L	L	V	I	S	E	E	V	G	V	A	K	P	N	K	K	I
Query Conservation													.																					.	.
Alig confidence													.																					.	.																														.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	D	K	V	A	S	V	Y	E	A	P	G	F	F	L	D	L	E	P	I	P	G	A	L	D	A	V	R	E	M	N	D	L	P	D	T	Q	V	F	I	C	T	S	P	L	L	K	Y	H	H	C	V	G	E	K	Y	R	W	V	E	Q	H	L	.	.	.	.	.	.	.	.	.	.	G	P	Q	F	V	E	R
Template Known Secondary structure										T	S	T	T	T	T	T	T			B		T	T											S	T	T											S	S		T	T	T													.	.	.	.	.	.	.	.	.	.						T	T
Template Predicted Secondary structure																																																																	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		58	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120											.	.	.	.	.	.	.
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	D	Y	A	L	E	Q	A	G	N	P	D	R	S	R	V	L	M	V	G	D	T	A	E	S	D	I	L	G	G	I	N	A	G	L	A	T	C	W	L	N	A	H	H	R	E	Q	P	E	G	I	A	P	T	W	T	V	S	S	L	H	E	L	E	Q	L	L	C	K	H
Query Conservation
Alig confidence															.	.	.	.
Template Conservation															.	.	.	.
Template Sequence		I	I	L	T	R	D	K	T	V	V	L	G	D	.	.	.	.	L	L	I	D	D	K	D	T	V	R	G	Q	E	E	T	P	S	W	E	H	I	L	F	T	C	C	H	N	R	H	L	V	L	P	P	T	R	R	R	L	L	S	W	S	D	N	W	R	E	I	L	D	S
Template Known Secondary structure						S		G	G	G	S			S	.	.	.	.						S	S				S	S		S	S		S	S								G	G	G	T	T					T	T	S						T	T	S								T
Template Predicted Secondary structure															.	.	.	.
Template SS confidence
		128	.	130	.	.	.	.	.	.	.	.	.	140					.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions