Job Description P0A8Y1 Confidence 99.87% Date Thu Jan 5 11:08:57 GMT 2012 Rank 44 Aligned Residues 204 % Identity 9% Template c2g80C_ PDB info PDB header:hydrolase Chain: C: PDB Molecule:protein utr4; PDBTitle: crystal structure of utr4 protein (unknown transcript 4 protein)2 (yel038w) from saccharomyces cerevisiae at 2.28 a resolution Resolution 2.28 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.										20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.
Predicted Secondary structure																			.	.	.	.	.	.	.	.	.
Query SS confidence																			.	.	.	.	.	.	.	.	.
Query Sequence		W	D	W	I	F	F	D	A	D	E	T	L	F	T	F	D	S	.	.	.	.	.	.	.	.	.	F	T	G	L	Q	R	M	F	L	D	Y	S	V	T	F	T	A	E	D	F	Q	D	Y	Q	A	V	N	K	P	L	W	V	D	Y	Q	N	G	A	I	T	S	L	Q	L	Q	H	G	R	F	E	S	W	A	E
Query Conservation																			.	.	.	.	.	.	.	.	.
Alig confidence																			.	.	.	.	.	.	.	.	.																																																						.
Template Conservation																																																																																	.
Template Sequence		Y	S	T	Y	L	L	D	I	E	G	T	V	C	P	I	S	F	V	K	E	T	L	F	P	Y	F	T	N	K	V	P	Q	L	V	Q	Q	D	T	R	D	S	P	V	S	N	I	L	S	Q	F	H	I	D	N	K	E	Q	L	Q	A	H	I	L	E	L	V	A	K	D	V	K	D	P	I	L	K	Q	L	Q	.
Template Known Secondary structure			S							B	T	T	T	B		T	T					T															S			T	T									T	T																		T	T											.
Template Predicted Secondary structure																																																																																	.
Template SS confidence
		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.
		74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.											.	.	.	.	.	.	.	140	.	.	.
Predicted Secondary structure																																																													.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																													.	.	.	.	.	.	.	.	.	.
Query Sequence		R	L	N	V	E	P	G	K	L	N	E	A	F	I	N	A	M	A	E	I	C	T	P	L	P	G	A	V	S	L	L	N	A	I	R	G	N	A	K	I	G	I	I	T	N	G	F	S	A	L	Q	Q	V	R	L	E	R	T	G	.	.	.	.	.	.	.	.	.	.	L	R	D	Y	F	D	L	L	V	I	S
Query Conservation																																																													.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.																																																			.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	G	Y	V	W	A	H	G	Y	E	S	G	Q	I	K	A	P	V	Y	A	D	A	I	D	F	I	K	R	K	K	R	V	F	I	Y	S	S	G	S	V	K	A	Q	K	L	L	F	G	Y	V	Q	D	P	N	A	P	A	H	D	S	L	D	L	N	S	Y	I	D	G	Y	F	D
Template Known Secondary structure		.	.	.	.	.	.	.	.	.										T	T	S			B											T	T		S							S	S											S	B			T	T	S	T	T	S			B			G	G	G
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.
Template SS confidence
											98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
		144	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	E	V	G	V	A	K	P	N	K	K	I	F	D	Y	A	L	E	Q	A	G	N	P	D	R	S	R	V	L	M	V	G	D	T	A	E	S	D	I	L	G	G	I	N	A	G	L	A	T	C	W	L	N	A	H	H	R	E	Q	P	E	G	I	A	P	T	W	T	V	S	S	L	H	E	L
Query Conservation
Alig confidence																								.													.
Template Conservation																								.													.
Template Sequence		I	N	T	S	G	K	K	T	E	T	Q	S	Y	A	N	I	L	R	D	I	G	A	.	K	A	S	E	V	L	F	L	S	D	N	P	.	L	E	L	D	A	A	A	G	V	G	I	A	T	G	L	A	S	R	P	G	N	A	P	V	P	D	G	Q	K	Y	Q	V	Y	K	N	F	E	T	L
Template Known Secondary structure								T	T													T		.		G	G	G						S			.								T	T	T									T	T	S					T	T		S	S				S	S	S	T	T
Template Predicted Secondary structure																								.													.
Template SS confidence
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190		.	.	.	.	.	.	.	.	.	200	.	.		.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions