Job Description P0A8Y1 Confidence 72.59% Date Thu Jan 5 11:08:57 GMT 2012 Rank 150 Aligned Residues 103 % Identity 15% Template c2b8eB_ PDB info PDB header:membrane protein Chain: B: PDB Molecule:cation-transporting atpase; PDBTitle: copa atp binding domain Resolution 2.30 Å

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		95	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	P	L	P	G	A	V	S	L	L	N	A	I	R	G	N	A	K	I	G	I	I	T	N	G	F	S	A	L	Q	Q	V	R	L	E	R	T	G	L	R	D	Y	F	D	L	L	V	I	S	E	E	V	G	V	A	K	P	N	K	K	I	F	D	Y	A	L	E	Q	A	G	N	P	D	R	S	R	V	L	M	V
Query Conservation
Alig confidence																																														.	.	.	.	.	.	.	.	.	.																		.	.
Template Conservation																																														.	.	.	.	.	.	.	.	.	.																		.	.
Template Sequence		T	L	K	E	S	A	K	P	A	V	Q	E	L	K	R	X	G	I	K	V	G	X	I	T	G	D	N	W	R	S	A	E	A	I	S	R	E	L	N	L	D	L	V	I	.	.	.	.	.	.	.	.	.	.	A	E	V	L	P	H	Q	K	S	E	E	V	K	K	L	Q	A	.	.	K	E	V	V	A	F	V
Template Known Secondary structure			B		T	T											T	T								S	S												T	T		S				.	.	.	.	.	.	.	.	.	.		S			T	T										T	T	.	.	T	S
Template Predicted Secondary structure																																														.	.	.	.	.	.	.	.	.	.																		.	.
Template SS confidence
		549	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.											.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.			610	.	.	.	.	.	.
		175	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.			.	.	.	.	.	.	.	220	.	.	.
Predicted Secondary structure																																								.	.
Query SS confidence																																								.	.
Query Sequence		G	D	T	A	E	S	D	I	L	G	G	I	N	A	G	L	A	T	C	W	L	N	A	H	H	R	E	Q	P	E	G	I	A	P	T	W	T	V	.	.	S	S	L	H	E	L	E	Q	L	L	C
Query Conservation																																								.	.
Alig confidence						.																.	.	.	.	.	.	.	.	.	.	.	.	.						.	.
Template Conservation						.																.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	D	G	I	.	N	D	A	P	A	L	A	Q	A	D	L	G	I	A	V	.	.	.	.	.	.	.	.	.	.	.	.	.	G	D	I	V	L	I	R	D	D	L	R	D	V	V	A	A	I	Q
Template Known Secondary structure				S	S	.	T	T							S	S						.	.	.	.	.	.	.	.	.	.	.	.	.						S	S			T								T
Template Predicted Secondary structure						.																.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		617	.	.	620		.	.	.	.	.	.	.	.	.	630	.	.	.	.	.														.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions