Job Description P0ACJ5 Confidence 97.64% Date Thu Jan 5 11:18:18 GMT 2012 Rank 33 Aligned Residues 83 % Identity 18% Template d1ulya_ SCOP info DNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain Hypothetical protein PH1932 Resolution 2.50

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Show / Hide Conservation and Alignment quality

		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.			50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure																																																	.	.
Query SS confidence																																																	.	.
Query Sequence		D	K	I	D	R	K	L	L	A	L	L	Q	Q	D	C	T	L	S	L	Q	A	L	A	E	A	V	N	L	T	T	T	P	C	W	K	R	L	K	R	L	E	D	D	G	I	L	I	.	.	G	K	V	A	L	L	D	P	E	K	I	G	L	G	L	T	A	F	V	L	I	K	T	Q	H	H	S	S	E	W	Y
Query Conservation																																																	.	.
Alig confidence													.																																				.	.
Template Conservation													.
Template Sequence		E	D	T	R	R	K	I	L	K	L	L	.	R	N	K	E	X	T	I	S	Q	L	S	E	I	L	G	K	T	P	Q	T	I	Y	H	H	I	E	K	L	K	E	A	G	L	V	E	V	K	R	T	E	X	K	G	N	L	V	E	K	Y	Y	G	R	T	A	D	V	F	Y	I	N	L	Y	L	G	D	E	E	L
Template Known Secondary structure		S											.	T	T			B										T																T	T	S										T	T									S	S	S						S		S	S
Template Predicted Secondary structure													.
Template SS confidence
		19	20	.	.	.	.	.	.	.	.	.		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.
		81	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	R	F	V	T	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	Y	I	A	R	S
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		98	.	100	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions