 |
Job Description | P0ACJ5 | Confidence | 85.95% | Date | Thu Jan 5 11:18:18 GMT 2012 |
Rank | 353 | Aligned Residues | 36 |
% Identity | 28% | Template | d1in4a1 |
SCOP info | DNA/RNA-binding 3-helical bundle
| "Winged helix" DNA-binding domain
| Helicase DNA-binding domain
|
Resolution | 1.60 |
|
  |   |
2 | . | . | . | . | . | . | . | 10 | . | . | . | . | . | |
|
|
. | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  |  |  | . | . | . |
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | D | K | I | D | R | K | L | L | A | L | L | Q | Q | . |
. |
. |
D | C | T | L | S | L | Q | A | L | A | E | A | V | N | L | T | T | T | P | C | W | K |
Query Conservation |   |
|
|   |   |
|   |   |
|
|   |   |
|   |   | . | . | . |
|   |
|   |
|   |   |
|
|
|   |   |
|
|   |
|   |   |
|
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|   |   |
|   |   |
|
|   |   |
|
|   |   |
|   |
|
|
|
|
|
|   |
|
|
|   |   |
|   |
|   |   |   |
|
|
|   |
Template Sequence |   |
L | D | E | F | D | R | K | I | L | K | T | I | I | E | I | Y | R | G | G | P | V | G | L | N | A | L | A | A | S | L | G | V | E | A | D | T | L | S | E |
Template Known Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  | S | T | T |
|
| B |
|  |  |  |  |  |  |  |  | T | S |
|  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
257 | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|