Return to main results Retrieve Phyre Job Id

Job DescriptionP0ACJ5
Confidence83.79%DateThu Jan 5 11:18:18 GMT 2012
Rank391Aligned Residues56
% Identity18%Templatec2yu3A_
PDB info PDB header:transcriptionChain: A: PDB Molecule:dna-directed rna polymerase iii 39 kda PDBTitle: solution structure of the domain swapped wingedhelix in dna-2 directed rna polymerase iii 39 kda polypeptide
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10........ .20.........30.........40.........50.......
Predicted Secondary structure 




..









Query SS confidence 
















. .






































Query Sequence  LDKIDRKLLALLQQDCT. . LSLQALAEAVNLTTTPCWKRLKRLEDDGILIGKVALLDP
Query Conservation 

  
  

  
  
 
.. 
  


  

 
  

  

 

   


      
  
Alig confidence 
















..






































Template Conservation 
  

 


  
  

  







 



    
 
 

 



 







   
Template Sequence  SDNQEKLVYQIIEDAGNKGIWSRDVRYKSNLPLTEINKILKNLESKKLIKAVKSVSGP
Template Known Secondary structure 
STTS
T

TS

S
SS
Template Predicted Secondary structure 



















Template SS confidence 

























































   35....40.........50.........60.........70.........80.........90..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions