 |
Job Description | P0ACJ5 | Confidence | 94.60% | Date | Thu Jan 5 11:18:18 GMT 2012 |
Rank | 197 | Aligned Residues | 47 |
% Identity | 17% | Template | c2xigA_ |
PDB info |
PDB header:transcription | Chain: A: PDB Molecule:ferric uptake regulation protein; |
PDBTitle: the structure of the helicobacter pylori ferric uptake2 regulator fur reveals three functional metal binding sites
|
Resolution | 1.85 Å |
|
  |   |
7 | . | . | 10 | . | . | . | . | . | . | . | . | |
. | 20 | . | . | . | . | . | . | . | . | |
|
|
|
|
. | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
|
| . |
|
|  |  |  |  |  |  |  |  | . | . | . | . | . |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
R | K | L | L | A | L | L | Q | Q | D | C | T | . |
L | S | L | Q | A | L | A | E | A | V | . |
. |
. |
. |
. |
N | L | T | T | T | P | C | W | K | R | L | K | R | L | E | D | D | G | I | L | I | G | K | V | A |
Query Conservation |   |
  |   |
|
|   |   |
|   |   |
|   |
| . |   |
|   |   |
|
|
|   |   |
| . | . | . | . | . |
|   |
|   |   |
|
|   |   |
|
|   |
|
|   |   |   |
|
|
|   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|
|   |   |
|   |   |   |   |   |
|   |
|
|   |
|
|   |   |   |
|   |   |   |   |   |   |
|
|   |   |
|
|
|
|   |
|   |   |
|   |   |   |
|
|
|   |   |   |   |   |
Template Sequence |   |
E | E | V | V | S | V | L | Y | R | S | G | T | H | L | S | P | E | E | I | T | H | S | I | R | Q | K | D | K | N | T | S | I | S | S | V | Y | R | I | L | N | F | L | E | K | E | N | F | I | S | V | L | E | T |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |
| S | S |
| B |
|  |  |  |  |  |  |  |  |  |  |  | S | T | T |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | S |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|