Job Description P0ACJ5 Confidence 100.00% Date Thu Jan 5 11:18:18 GMT 2012 Rank 10 Aligned Residues 145 % Identity 21% Template c2ia0A_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:putative hth-type transcriptional regulator pf0864; PDBTitle: transcriptional regulatory protein pf0864 from pyrococcus furiosus a2 member of the asnc family (pf0864) Resolution 2.37 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.			.	.	.	.	.
Predicted Secondary structure																																																																											.	.
Query SS confidence																																																																											.	.
Query Sequence		L	D	K	I	D	R	K	L	L	A	L	L	Q	Q	D	C	T	L	S	L	Q	A	L	A	E	A	V	N	L	T	T	T	P	C	W	K	R	L	K	R	L	E	D	D	G	I	L	I	G	K	V	A	L	L	D	P	E	K	I	G	L	G	L	T	A	F	V	L	I	K	T	Q	H	.	.	H	S	S	E	W
Query Conservation																																																																											.	.
Alig confidence																																																																											.	.
Template Conservation
Template Sequence		L	D	D	L	D	R	N	I	L	R	L	L	K	K	D	A	R	L	T	I	S	E	L	S	E	Q	L	K	K	P	E	S	T	I	H	F	R	I	K	K	L	Q	E	R	G	V	I	E	R	Y	T	I	I	L	G	E	Q	L	K	P	K	H	L	A	L	I	V	L	E	V	G	K	P	E	D	F	L	E	R	Y
Template Known Secondary structure																	T	T											T	S															T	T	S	S									T	T	T	S		S										S
Template Predicted Secondary structure
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	C	R	F	V	T	V	V	T	E	M	P	E	V	L	G	F	W	R	M	A	G	E	Y	D	Y	L	M	R	V	Q	V	A	D	M	K	R	Y	D	E	F	Y	K	R	L	V	N	S	V	P	G	L	S	D	V	T	S	S	F	A	M	E	Q	I	K	Y	T	T
Query Conservation
Alig confidence																				.
Template Conservation																				.
Template Sequence		I	S	Y	I	S	S	T	L	S	A	L	P	G	V	L	F	V	A	.	K	S	G	E	D	K	I	I	A	L	V	G	K	N	N	K	D	E	L	V	K	F	I	E	E	N	I	T	S	I	P	N	L	K	H	I	Q	I	F	P	I	T	E	I	K	K	G	E	D
Template Known Secondary structure											T	S	T	T						.			T	T	T									S	S	T	T										T	T	T	S	T	T													S	S		T	T
Template Predicted Secondary structure																				.
Template SS confidence
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.		.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions