Job Description P0ACJ5 Confidence 85.77% Date Thu Jan 5 11:18:18 GMT 2012 Rank 358 Aligned Residues 49 % Identity 24% Template c1w7pD_ PDB info PDB header:protein transport Chain: D: PDB Molecule:vps36p, ylr417w; PDBTitle: the crystal structure of endosomal complex escrt-ii2 (vps22/vps25/vps36) Resolution 3.60 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.								.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50
Predicted Secondary structure																			.	.	.	.	.	.	.
Query SS confidence																			.	.	.	.	.	.	.
Query Sequence		L	D	K	I	D	R	K	L	L	A	L	L	Q	Q	D	C	T	.	.	.	.	.	.	.	L	S	L	Q	A	L	A	E	A	V	N	L	T	T	T	P	C	W	K	R	L	K	R	L	E	D	D	G	I	L	I	G
Query Conservation																			.	.	.	.	.	.	.
Alig confidence																			.	.	.	.	.	.	.
Template Conservation
Template Sequence		F	D	V	V	K	E	K	L	V	D	L	I	G	D	N	P	G	S	D	L	L	R	L	T	Q	I	L	S	S	N	N	S	K	S	N	W	T	L	G	I	L	M	E	V	L	Q	N	C	V	D	E	G	D	L	L	I
Template Known Secondary structure														T	T	S	T	T											S		S	S	S				B															T	T	S
Template Predicted Secondary structure
Template SS confidence
		492	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions