Job Description P77806 Confidence 99.84% Date Thu Jan 5 12:33:00 GMT 2012 Rank 206 Aligned Residues 371 % Identity 16% Template d3bc8a1 SCOP info PLP-dependent transferase-like PLP-dependent transferases SepSecS-like Resolution 1.65

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.							20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70				.	.	.	.	.	.
Predicted Secondary structure																.	.	.	.	.	.																																																				.	.	.
Query SS confidence																.	.	.	.	.	.																																																				.	.	.
Query Sequence		L	I	P	Q	S	K	L	P	Q	L	G	T	T	I	.	.	.	.	.	.	F	T	Q	M	S	A	L	A	Q	Q	H	Q	A	I	N	L	S	Q	G	F	P	D	F	D	G	P	R	Y	L	Q	E	R	L	A	H	H	V	A	Q	G	A	N	Q	Y	A	P	M	T	G	V	Q	.	.	.	A	L	R	E	A	I
Query Conservation																.	.	.	.	.	.																																																				.	.	.
Alig confidence																.	.	.	.	.	.																																																				.	.	.
Template Conservation
Template Sequence		L	L	E	Q	G	K	C	P	E	D	G	W	D	E	S	T	L	E	L	F	L	H	E	L	A	V	M	D	S	N	N	F	L	G	N	C	G	V	G	E	R	E	G	R	V	A	S	A	L	V	A	R	R	H	Y	R	F	I	H	G	I	G	R	Q	P	K	A	A	G	S	S	L	L	N	K	I	T	N	S	L
Template Known Secondary structure										S	S																	T	B	G	G	G		T	T					S	S						S								T	T	T			S		B					S	B
Template Predicted Secondary structure
Template SS confidence
		35	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.		.	.	.	.	.	.	.	.	110	.	.				.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.			.	.	.	.	.	150
Predicted Secondary structure																											.												.	.	.																																	.	.
Query SS confidence																											.												.	.	.																																	.	.
Query Sequence		A	Q	K	T	E	R	L	Y	G	Y	Q	P	D	A	D	S	D	I	T	V	T	A	G	A	T	.	E	A	L	Y	A	A	I	T	A	L	V	.	.	.	R	N	G	D	E	V	I	C	F	D	P	S	Y	D	S	Y	A	P	A	I	A	L	S	G	G	I	V	K	R	M	A	L	.	.	Q	P	P	H	F	R
Query Conservation																											.												.	.	.																																	.	.
Alig confidence																	.	.									.												.	.	.																																	.	.
Template Conservation																	.	.
Template Sequence		V	L	N	V	I	K	L	A	G	V	H	S	V	A	S	.	.	C	F	V	V	P	M	A	T	G	M	S	L	T	L	C	F	L	T	L	R	H	K	R	P	K	A	K	Y	I	I	W	P	R	I	D	Q	K	S	C	F	K	S	M	V	T	A	G	F	E	P	V	V	I	E	N	V	L	E	G	D	E	L	R
Template Known Secondary structure										T		T	T				.	.					S	S																		T	T																					T	T												T	T
Template Predicted Secondary structure																	.	.
Template SS confidence
		122	.	.	.	.	.	.	.	130	.	.	.	.	.	.			.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.
		151	.	.	.	.	.	.	.	.	160					.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.
Predicted Secondary structure												.	.	.	.
Query SS confidence												.	.	.	.
Query Sequence		V	D	W	Q	E	F	A	A	L	L	.	.	.	.	S	E	R	T	R	L	V	I	L	N	T	P	H	N	P	S	A	T	V	W	Q	Q	A	D	F	A	A	L	W	Q	A	I	A	G	H	E	I	F	V	I	S	D	E	V	Y	E	H	I	N	F	S	Q	Q	G	H	A	S	V	L	A	H	P	Q	L	R	E
Query Conservation												.	.	.	.
Alig confidence												.	.	.	.																								.	.	.																								.	.
Template Conservation																																							.	.	.																								.	.
Template Sequence		T	D	L	K	A	V	E	A	K	I	Q	E	L	G	P	E	H	I	L	C	L	H	S	T	T	A	C	F	A	P	R	V	P	D	R	L	E	.	.	.	E	L	A	V	I	C	A	N	Y	D	I	P	H	V	V	N	N	A	Y	G	L	Q	S	.	.	S	K	C	M	H	L	I	Q	Q	G	A	R	V	G	R
Template Known Secondary structure																G	G	G								S	S			T	T	B							.	.	.										T								T	T	T	T	T		.	.														S
Template Predicted Secondary structure																																							.	.	.																								.	.
Template SS confidence
		200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.				.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.			260	.	.	.	.	.	.	.	.	.	270	.	.	.	.
		227	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	A	V	A	V	S	S	F	G	K	T	Y	H	M	T	G	W	K	V	G	Y	C	V	A	P	A	P	I	S	A	E	I	R	K	V	H	Q	Y	L	T	F	S	V	N	T	P	A	Q	L	A	L	A	D	M	L	R	A	E	P	E	H	Y	L	A	L	P	D	F	Y	R	Q	K	R	D	I	L	V	N	A	L
Query Conservation
Alig confidence														.																					.	.
Template Conservation														.																					.	.
Template Sequence		I	D	A	F	V	Q	S	L	D	N	F	M	.	V	P	V	G	G	A	I	I	A	G	F	N	E	P	F	I	Q	D	I	S	.	.	K	M	Y	P	G	R	A	S	A	S	P	S	L	D	V	L	I	T	L	L	S	L	G	C	S	G	Y	R	K	L	L	K	E	R	K	E	M	F	V	Y	L	S	T	Q	L
Template Known Secondary structure													S	.			S	S							S										.	.			S		S		B		S
Template Predicted Secondary structure														.																					.	.
Template SS confidence
		275	.	.	.	.	280	.	.	.	.	.	.		.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.			.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.
		307	.					.	310	.	.	.	.	.	.	.	.				.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.																	.	.	.	360	.	.	.
Predicted Secondary structure				.	.	.	.											.	.	.																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence				.	.	.	.											.	.	.																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		N	E	.	.	.	.	S	R	L	E	I	L	P	C	E	G	.	.	.	T	Y	F	L	L	V	D	Y	S	A	V	S	T	L	D	D	V	E	F	C	Q	W	L	T	Q	E	H	G	V	A	A	I	P	L	S	V	F	C	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	D	P	F	P	H	K
Query Conservation				.	.	.	.											.	.	.																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence				.	.	.	.											.	.	.																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	K	L	A	E	A	H	N	E	R	L	L	Q	T	P	H	N	P	I	S	L	A	M	T	L	K	T	I	D	G	H	H	D	K	A	V	T	Q	L	G	S	M	L	F	T	R	Q	V	S	G	A	R	A	V	P	L	G	N	V	Q	T	V	S	G	H	T	F	R	G	F	M	S	H	A	D	N	Y	P	C	A
Template Known Secondary structure								T	T			B				T	T		S	S							T	T	T	S	S	S	S	S													T	T			S						S							T	T					T	T	T	T	T	S	S			S	S
Template Predicted Secondary structure
Template SS confidence
		353	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.
		364	.	.	.	.	.	370			.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.
Predicted Secondary structure									.	.
Query SS confidence									.	.
Query Sequence		L	I	R	L	C	F	A	.	.	K	K	E	S	T	L	L	A	A	A	E	R	L	R	Q	L
Query Conservation									.	.
Alig confidence									.	.
Template Conservation
Template Sequence		Y	L	N	A	A	A	A	I	G	M	K	M	Q	D	V	D	L	F	I	K	R	L	D	K	C
Template Known Secondary structure									T	T
Template Predicted Secondary structure
Template SS confidence
		433	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions