Job Description P77806 Confidence 99.93% Date Thu Jan 5 12:33:00 GMT 2012 Rank 158 Aligned Residues 336 % Identity 17% Template d2gsaa_ SCOP info PLP-dependent transferase-like PLP-dependent transferases GABA-aminotransferase-like Resolution 2.40

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		28	.	30	.	.	.	.	.	.	.	.			.	40	.	.	.		.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.
Predicted Secondary structure													.	.						.
Query SS confidence													.	.						.
Query Sequence		Q	Q	H	Q	A	I	N	L	S	Q	G	.	.	F	P	D	F	D	.	G	P	R	Y	L	Q	E	R	L	A	H	H	V	A	Q	G	A	N	Q	Y	A	P	M	T	G	V	Q	A	L	R	E	A	I	A	Q	K	T	E	R	L	Y	G	Y	Q	P	D	A	D	S	D	I	T	V	T	A	G	A	T	E	A	L
Query Conservation													.	.						.
Alig confidence													.	.						.																																						.	.	.	.	.	.	.	.
Template Conservation																																																										.	.	.	.	.	.	.	.
Template Sequence		D	G	N	R	Y	I	D	Y	V	G	T	W	G	P	A	I	C	G	H	A	H	P	E	V	I	E	A	L	K	V	A	M	E	K	G	T	S	F	G	A	P	C	A	L	E	N	V	L	A	E	M	V	N	D	A	V	.	.	.	.	.	.	.	.	P	S	I	E	M	V	R	F	V	N	S	G	T	E	A	C
Template Known Secondary structure		T	S						S	S	G	G	G	T	T	T	T	T		B	T													T	T		S			S	S																S	.	.	.	.	.	.	.	.	T	T		S						S	S
Template Predicted Secondary structure																																																										.	.	.	.	.	.	.	.
Template SS confidence
		56	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.									.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.
		105	.	.	.	.	110	.	.			.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.															.	.	.	.	.	.	.	.	160	.	.	.	.	.
Predicted Secondary structure										.	.																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.
Query SS confidence										.	.																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.
Query Sequence		Y	A	A	I	T	A	L	V	.	.	R	N	G	D	E	V	I	C	F	D	P	S	Y	D	S	Y	A	P	A	I	A	L	S	G	G	I	V	K	R	M	A	L	Q	P	P	H	F	R	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	W	Q	E	F	A	A	L	L	S	E	R	T	R	.	.	.
Query Conservation										.	.																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.
Alig confidence										.	.																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.
Template Conservation
Template Sequence		M	A	V	L	R	L	M	R	A	Y	T	G	R	D	K	I	I	K	F	E	G	C	Y	H	G	H	A	D	M	F	L	V	K	A	G	S	G	V	A	T	L	G	L	P	S	S	P	G	V	P	K	K	T	T	A	N	T	L	T	T	P	Y	N	D	L	E	A	V	K	A	L	F	A	E	N	P	G	E	I	A
Template Known Secondary structure																					T	T					S		G	G	G		S	S								T	T			S		S	S	S						T	T						T	T										T	T	S	T	T	T
Template Predicted Secondary structure
Template SS confidence
		128	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.
			166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.
Predicted Secondary structure		.
Query SS confidence		.
Query Sequence		.	L	V	I	L	N	T	P	H	N	P	S	A	T	V	W	Q	Q	A	D	F	A	A	L	W	Q	A	I	A	G	H	E	I	F	V	I	S	D	E	V	Y	E	H	I	N	F	S	Q	Q	G	H	A	S	V	L	A	H	P	Q	L	R	E	R	A	V	A	V	S	S	F	G	K	T	Y	H	M	T	G	W	K
Query Conservation		.
Alig confidence		.																																																												.	.	.	.	.	.										.
Template Conservation																																																														.	.	.	.	.	.										.
Template Sequence		G	V	I	L	E	P	I	V	G	N	S	G	F	I	V	P	D	A	G	F	L	E	G	L	R	E	I	T	L	E	H	D	A	L	L	V	F	D	E	V	M	T	G	F	R	I	A	Y	G	G	V	Q	E	K	F	G	V	T	P	D	.	.	.	.	.	.	L	T	T	L	G	K	I	I	G	.	G	G	L	P
Template Known Secondary structure							S	S	B		S	S	S		B				T	T												T	T								T	T	T	B	T	T	T	B	T	T						T	T				S	.	.	.	.	.	.						G	G	G	G	.	T	T	S
Template Predicted Secondary structure																																																														.	.	.	.	.	.										.
Template SS confidence
		208	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.							.	.	270	.	.	.	.	.	.		.	.	.	280
		245	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.				.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.			.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																							.	.	.																		.	.
Query SS confidence																							.	.	.																		.	.
Query Sequence		V	G	Y	C	V	A	P	A	P	I	S	A	E	I	R	K	V	H	Q	Y	L	.	.	.	T	F	S	V	N	T	P	A	Q	L	A	L	A	D	M	L	R	.	.	A	E	P	E	H	Y	L	A	L	P	D	F	Y	R	Q	K	R	D	I	L	V	N	A	L	N	E	S	R	L	E	I	L	P	C	E	G	T
Query Conservation																							.	.	.																		.	.
Alig confidence																							.	.	.																		.	.
Template Conservation
Template Sequence		V	G	A	Y	G	G	K	R	E	I	M	Q	L	V	A	P	A	G	P	M	Y	Q	A	G	T	L	S	G	N	P	L	A	M	T	A	G	I	K	T	L	E	L	L	R	Q	P	G	T	Y	E	Y	L	D	Q	I	T	K	R	L	S	D	G	L	L	A	I	A	Q	E	T	G	H	A	A	C	G	G	Q	V	S
Template Known Secondary structure													T	T	B	T	T	T	S	S	B					T	T	T	T																T	S	T	T																							T	T									T
Template Predicted Secondary structure
Template SS confidence
		281	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360
		320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.											.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.
Predicted Secondary structure																			.	.	.	.	.	.	.	.	.	.
Query SS confidence																			.	.	.	.	.	.	.	.	.	.
Query Sequence		Y	F	L	L	V	D	Y	S	A	V	S	T	L	D	D	V	E	.	.	.	.	.	.	.	.	.	.	F	C	Q	W	L	T	Q	E	H	G	V	A	A	I	P	L	S	V	F	C	A	D	P	F	P	H	K	L	I	R	L	C	F	A	K	K	E	S	T	L	L	A	A	A	E	R	L	R	Q	L
Query Conservation																			.	.	.	.	.	.	.	.	.	.
Alig confidence																			.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.
Template Conservation																																																.	.	.	.	.	.	.	.
Template Sequence		G	M	F	G	F	F	F	T	E	G	P	V	H	N	Y	E	D	A	K	K	S	D	L	Q	K	F	S	R	F	H	R	G	M	L	E	Q	G	I	Y	L	A	P	S	Q	F	E	.	.	.	.	.	.	.	.	A	G	F	T	S	L	A	H	T	E	E	D	I	D	A	T	L	A	A	A	R	T	V
Template Known Secondary structure		T						S	S	S					S					T	T	S															T	T					S	S	T	T	S	.	.	.	.	.	.	.	.						T	T
Template Predicted Secondary structure																																																.	.	.	.	.	.	.	.
Template SS confidence
		361	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.									.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions