Job Description P77806 Confidence 99.93% Date Thu Jan 5 12:33:00 GMT 2012 Rank 161 Aligned Residues 326 % Identity 13% Template d2fnua1 SCOP info PLP-dependent transferase-like PLP-dependent transferases GABA-aminotransferase-like Resolution 1.50

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		34	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.
Predicted Secondary structure																																																																																.	.
Query SS confidence																																																																																.	.
Query Sequence		N	L	S	Q	G	F	P	D	F	D	G	P	R	Y	L	Q	E	R	L	A	H	H	V	A	Q	G	A	N	Q	Y	A	P	M	T	G	V	Q	A	L	R	E	A	I	A	Q	K	T	E	R	L	Y	G	Y	Q	P	D	A	D	S	D	I	T	V	T	A	G	A	T	E	A	L	Y	A	A	I	T	A	L	.	.
Query Conservation																																																																																.	.
Alig confidence												.	.															.	.																							.	.	.	.	.	.	.	.	.																				.	.
Template Conservation												.	.															.	.																							.	.	.	.	.	.	.	.	.
Template Sequence		E	F	A	Y	S	E	P	C	L	D	.	.	K	E	D	K	K	A	V	L	E	V	L	N	S	K	.	.	Q	L	T	Q	G	K	R	S	L	L	F	E	E	A	L	C	E	F	L	G	V	K	.	.	.	.	.	.	.	.	.	H	A	L	V	F	N	S	A	T	S	A	L	L	T	L	Y	R	N	F	S	E
Template Known Secondary structure					S							.	.												T	S	S	.	.			S	S	S															T		S	.	.	.	.	.	.	.	.	.						S													S	S
Template Predicted Secondary structure												.	.															.	.																							.	.	.	.	.	.	.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.			.	.	.	.	.	.	.	20	.	.	.	.	.	.			.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.										.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.
			112	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190
Predicted Secondary structure		.
Query SS confidence		.
Query Sequence		.	V	R	N	G	D	E	V	I	C	F	D	P	S	Y	D	S	Y	A	P	A	I	A	L	S	G	G	I	V	K	R	M	A	L	Q	P	P	H	F	R	V	D	W	Q	E	F	A	A	L	L	S	E	R	T	R	L	V	I	L	N	T	P	H	N	P	S	A	T	V	W	Q	Q	A	D	F	A	A	L	W	Q
Query Conservation		.
Alig confidence		.																																									.	.	.	.																													.	.	.
Template Conservation																																											.	.	.	.																													.	.	.
Template Sequence		F	S	A	D	R	N	E	I	I	T	T	P	I	S	F	V	A	T	A	N	M	L	L	E	S	G	Y	T	P	V	F	A	G	I	K	N	D	G	N	I	D	.	.	.	.	E	L	A	L	E	K	L	I	N	E	R	T	K	A	I	V	S	V	D	Y	A	G	K	S	V	E	V	E	.	.	.	S	V	Q	K
Template Known Secondary structure				T	T	S							S	S	S		T									T	T								B		T	T	S	S	B		.	.	.	.	G	G	G	S	G	G	G			T	T									G	G	G							.	.	.
Template Predicted Secondary structure																																											.	.	.	.																													.	.	.
Template SS confidence
		70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110					.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.				.	140	.	.
		191	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260
Predicted Secondary structure																																																																								.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																								.	.	.	.	.	.	.	.	.	.
Query Sequence		A	I	A	G	H	E	I	F	V	I	S	D	E	V	Y	E	H	I	N	F	S	Q	Q	G	H	A	S	V	L	A	H	P	Q	L	R	E	R	A	V	A	V	S	S	F	G	K	T	Y	H	M	T	G	W	K	V	G	Y	C	V	A	P	A	P	I	S	A	E	I	R	K	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																																								.	.	.	.	.	.	.	.	.	.
Alig confidence																									.	.	.	.	.																						.																					.	.	.	.	.	.	.	.	.	.
Template Conservation																									.	.	.	.	.																						.
Template Sequence		L	C	K	K	H	S	L	S	F	L	S	D	S	S	H	A	L	G	S	E	Y	Q	N	.	.	.	.	.	K	K	V	G	G	F	A	L	A	S	V	F	S	F	H	A	I	K	P	I	T	.	T	A	E	G	G	A	V	V	T	N	D	S	E	L	H	E	K	M	K	L	F	R	S	H	G	M	L	K	K	D
Template Known Secondary structure							T								T	T		T	T				T	T	.	.	.	.	.			T	T	S	S	S	S								T	T	S	S	S		.		S	S							S												T	B	T	T				S	S
Template Predicted Secondary structure																									.	.	.	.	.																						.
Template SS confidence
		143	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.						.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.		.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.
								261	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.			.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.
Predicted Secondary structure		.	.	.	.	.	.																																																	.	.
Query SS confidence		.	.	.	.	.	.																																																	.	.
Query Sequence		.	.	.	.	.	.	V	H	Q	Y	L	T	F	S	V	N	T	P	A	Q	L	A	L	A	D	M	L	R	A	E	P	E	H	Y	L	A	L	P	D	F	Y	R	Q	K	R	D	I	L	V	N	A	L	N	E	.	.	S	R	L	E	I	L	P	C	E	G	T	Y	F	L	L	V	D	Y	S	A	V	S	T	L
Query Conservation		.	.	.	.	.	.																																																	.	.
Alig confidence		.	.	.	.	.	.																																																	.	.
Template Conservation
Template Sequence		F	F	E	G	E	V	K	S	I	G	H	N	F	R	L	N	E	I	Q	S	A	L	G	L	S	Q	L	K	K	A	P	F	L	M	Q	K	R	E	E	A	A	L	T	Y	D	R	I	F	K	D	N	P	Y	F	T	P	L	H	P	L	L	K	D	K	S	S	N	H	L	Y	P	I	L	M	H	Q	K	F	F	T
Template Known Secondary structure		S	S					S	S				B																T	T																				T	T		S	S				S	G	G	G		S	S					S								G	G	G	G	G
Template Predicted Secondary structure
Template SS confidence
		217	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.
		333	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.																		.	.	.	.	.	.	.	.	370	.			.	.	.	.	.	.	.	.	380	.	.	.	.	.	.
Predicted Secondary structure																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.
Query SS confidence																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.
Query Sequence		D	D	V	E	F	C	Q	W	L	T	Q	E	H	G	V	A	A	I	P	L	S	V	F	C	A	D	P	F	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	K	L	I	R	L	C	F	A	K	.	.	K	E	S	T	L	L	A	A	A	E	R	L	R	Q	L
Query Conservation																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.
Alig confidence											.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.
Template Conservation											.
Template Sequence		C	K	K	L	I	L	E	S	L	.	H	K	R	G	I	L	A	Q	V	H	Y	K	P	I	Y	Q	Y	Q	L	Y	Q	Q	L	F	N	T	A	P	L	K	S	A	E	D	F	Y	H	A	E	I	S	L	P	C	H	A	N	L	N	L	E	S	V	Q	N	I	A	H	S	V	L	K	T
Template Known Secondary structure		G									.			T	T				B						G	G	G	S																													T	T
Template Predicted Secondary structure											.
Template SS confidence
		297	.	.	300	.	.	.	.	.		.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions