Job Description P77806 Confidence 99.82% Date Thu Jan 5 12:33:00 GMT 2012 Rank 212 Aligned Residues 310 % Identity 17% Template d2ctza1 SCOP info PLP-dependent transferase-like PLP-dependent transferases Cystathionine synthase-like Resolution 2.60

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.
Predicted Secondary structure																																																																																.	.
Query SS confidence																																																																																.	.
Query Sequence		E	R	L	A	H	H	V	A	Q	G	A	N	Q	Y	A	P	M	T	G	V	Q	A	L	R	E	A	I	A	Q	K	T	E	R	L	Y	G	Y	Q	P	D	A	D	S	D	I	T	V	T	A	G	A	T	E	A	L	Y	A	A	I	T	A	L	V	R	N	G	D	E	V	I	C	F	D	P	S	Y	D	S	.	.
Query Conservation																																																																																.	.
Alig confidence																																								.	.	.	.	.																																				.	.
Template Conservation																																								.	.	.	.	.
Template Sequence		E	H	A	A	N	L	F	A	L	K	E	F	G	N	I	Y	S	R	I	M	N	P	T	V	D	V	L	E	K	R	L	A	A	L	E	G	G	K	.	.	.	.	.	A	A	L	A	T	A	S	G	H	A	A	Q	F	L	A	L	T	T	L	A	Q	A	G	D	N	I	V	S	T	P	N	L	Y	G	G	T	F
Template Known Secondary structure									T	T	T	T	G	G	G	S		B	T	T	B																T		S	.	.	.	.	.						S	S															T	T							S
Template Predicted Secondary structure																																								.	.	.	.	.
Template SS confidence
		37	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.						.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.
				128	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.
Predicted Secondary structure		.	.
Query SS confidence		.	.
Query Sequence		.	.	Y	A	P	A	I	A	L	S	G	G	I	V	K	R	M	A	L	Q	P	P	H	F	R	V	D	W	Q	E	F	A	A	L	L	S	E	R	T	R	L	V	I	L	N	T	P	H	N	P	S	A	T	V	W	Q	Q	A	D	F	A	A	L	W	Q	A	I	A	G	H	E	I	F	V	I	S	D	E	V	Y
Query Conservation		.	.
Alig confidence		.	.																				.	.	.	.	.																															.	.	.
Template Conservation																							.	.	.	.	.																															.	.	.
Template Sequence		N	Q	F	K	V	T	L	K	R	L	G	I	E	V	R	F	T	S	R	E	E	.	.	.	.	.	R	P	E	E	F	L	A	L	T	D	E	K	T	R	A	W	W	V	E	S	I	G	N	P	A	L	N	I	P	D	.	.	.	L	E	A	L	A	Q	A	A	R	E	K	G	V	A	L	I	V	D	N	T	F
Template Known Secondary structure						T					T	T								T	T		.	.	.	.	.											T	T								S	S		T	T	T						.	.	.												T								G	G
Template Predicted Secondary structure																							.	.	.	.	.																															.	.	.
Template SS confidence
		112	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.						.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.				.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.
		206	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250																																		.	.
Predicted Secondary structure																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	H	I	N	F	S	Q	Q	G	H	A	S	V	L	A	H	P	Q	L	R	E	R	A	V	A	V	S	S	F	G	K	T	Y	H	M	T	G	W	K	V	G	Y	C	V	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	A
Query Conservation																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence					.	.	.	.	.	.	.	.																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation					.	.	.	.	.	.	.	.
Template Sequence		G	M	G	.	.	.	.	.	.	.	.	G	Y	L	L	R	P	L	A	W	G	A	A	L	V	T	H	S	L	T	K	W	V	G	G	H	G	A	V	I	A	G	A	I	V	D	G	G	N	F	P	W	E	G	G	R	Y	P	L	L	T	E	P	Q	P	G	Y	H	G	L	R	L	T	E	A	F	G	E	L	A
Template Known Secondary structure		G	G	G	.	.	.	.	.	.	.	.	G	T	S			G	G	G	G	T		S						T	T	T	T	T	T		S	S											S		S			T	T	T	T						S		B	G	G	G	T	T	B							G	G	G
Template Predicted Secondary structure					.	.	.	.	.	.	.	.
Template SS confidence
		184	.	.									.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.
		253	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		P	I	S	A	E	I	R	K	V	H	Q	Y	L	T	F	S	V	N	T	P	A	Q	L	A	L	A	D	M	L	R	A	E	P	E	H	Y	L	A	L	P	D	F	Y	R	Q	K	R	D	I	L	V	N	A	L	N	E	S	R	L	E	I	L	P	C	E	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		F	I	V	K	A	R	V	D	G	L	R	D	Q	G	Q	A	L	G	P	F	E	A	W	V	V	L	L	G	M	E	T	L	S	L	R	A	E	R	H	V	E	N	T	L	H	L	A	H	W	L	L	E	Q	P	Q	V	A	W	V	N	Y	P	G	L	P	H	H	P	H	H	D	R	A	Q	K	Y	F	K	G	K
Template Known Secondary structure									T																						T	T																					T		T	T							T	T	S	T	T		T	T									T	T
Template Predicted Secondary structure
Template SS confidence
		256	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.
			319	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.																				.	.	.	.	.	.	.	.	370	.		.	.	.	.	.	.
Predicted Secondary structure		.																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.
Query SS confidence		.																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.
Query Sequence		.	T	Y	F	L	L	V	D	Y	S	A	V	S	T	L	D	D	V	E	F	C	Q	W	L	T	Q	E	H	G	V	A	A	I	P	L	S	V	F	C	A	D	P	F	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	K	L	I	R	L	C	F	A	K	.	K	E	S	T	L	L
Query Conservation		.																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.
Alig confidence		.											.	.																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.
Template Conservation													.	.
Template Sequence		P	G	A	V	L	T	F	G	L	K	G	.	.	G	Y	E	A	A	K	R	F	I	S	R	L	K	L	I	S	H	L	A	N	V	G	D	T	R	T	L	A	I	H	P	A	S	T	T	H	S	Q	L	S	P	E	E	Q	A	Q	A	G	V	S	P	E	M	V	R	L	S	V	G	L	E	H	V	E	D	L	K
Template Known Secondary structure				S							T	T	.	.											T		S	S	S				S					S	S						G	G	G	T	T	T	T	T	S									T			T	T								S	S
Template Predicted Secondary structure													.	.
Template SS confidence
		336	.	.	.	340	.	.	.	.	.	.			.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.
		378	.	380	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	A	A	E	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	E	L	K	E
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		414	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions