Job Description P77806 Confidence 99.95% Date Thu Jan 5 12:33:00 GMT 2012 Rank 137 Aligned Residues 320 % Identity 12% Template d2c0ra1 SCOP info PLP-dependent transferase-like PLP-dependent transferases GABA-aminotransferase-like Resolution 1.2

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		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.													.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.
Predicted Secondary structure																																									.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																									.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		H	Q	A	I	N	L	S	Q	G	F	P	D	F	D	G	P	R	Y	L	Q	E	R	L	A	H	H	V	A	Q	G	A	N	Q	Y	A	P	M	T	G	.	.	.	.	.	.	.	.	.	.	.	.	V	Q	A	L	R	E	A	I	A	Q	K	T	E	R	L	Y	G	Y	Q	P	D	A	D	S	D	I	T	V	T
Query Conservation																																									.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence											.	.																			.										.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.									.
Template Conservation											.	.																			.																																	.	.	.	.									.
Template Sequence		E	R	A	Y	N	F	N	A	G	.	.	P	A	A	L	P	L	E	V	L	E	R	A	Q	A	E	F	V	D	.	Y	Q	H	T	G	M	S	I	M	E	M	S	H	R	G	A	V	Y	E	A	V	H	N	E	A	Q	A	R	L	L	A	L	.	.	.	.	L	G	N	P	T	G	Y	K	.	V	L	F	I	Q
Template Known Secondary structure									S	S	.	.	S														T	S	S	S	.	S	T	T	S	S	S		G	G	G	S		T	T	S																		.	.	.	.	T	T			S	S			.					S
Template Predicted Secondary structure											.	.																			.																																	.	.	.	.									.
Template SS confidence
		3	.	.	.	.	.	.	10	.			.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.					.	.	.	.	.	.	.	.		70	.	.	.	.
		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.			.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.
Predicted Secondary structure																																.	.
Query SS confidence																																.	.
Query Sequence		A	G	A	T	E	A	L	Y	A	A	I	T	A	L	V	R	N	G	D	E	V	I	C	F	D	P	S	Y	D	S	.	.	Y	A	P	A	I	A	L	S	G	G	I	V	K	R	M	A	L	Q	P	P	H	F	R	V	D	W	Q	E	F	A	A	L	L	S	E	R	T	R	L	V	I	L	N	T	P	H	N	P
Query Conservation																																.	.
Alig confidence																																.	.
Template Conservation
Template Sequence		G	G	A	S	T	Q	F	A	M	I	P	M	N	F	L	K	E	G	Q	T	A	N	Y	V	M	T	G	S	W	A	S	K	A	L	K	E	A	K	L	I	G	D	T	H	V	A	A	S	S	E	A	S	N	Y	M	T	L	P	K	L	Q	E	I	Q	L	Q	D	N	A	A	Y	L	H	L	T	S	N	E	T	I
Template Known Secondary structure		S																T	T									S														S									G	G	G	T	T		S				G	G	G					T	T								S			T	T
Template Predicted Secondary structure
Template SS confidence
		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
		176	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	A	T	V	W	Q	Q	A	D	F	A	A	L	W	Q	A	I	A	G	H	E	I	F	V	I	S	D	E	V	Y	E	H	I	N	F	S	Q	Q	G	H	A	S	V	L	A	H	P	Q	L	R	E	R	A	V	A	V	S	S	F	G	K	T	Y	H	M	T	G	W	K	V	G	Y	C	V	A	P	A	P	I	S
Query Conservation
Alig confidence								.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.																				.	.
Template Conservation								.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.																				.	.
Template Sequence		E	G	A	Q	F	K	.	.	.	.	.	.	.	.	A	F	P	D	T	G	S	V	P	L	I	G	D	M	S	S	D	I	L	S	R	P	F	D	.	.	.	.	.	.	.	.	.	.	L	N	Q	F	G	L	V	Y	A	G	A	Q	K	N	L	G	P	S	G	.	.	V	T	V	V	I	V	R	E	D	L	V
Template Known Secondary structure		T	T				S	.	.	.	.	.	.	.	.	S					T	T	S							T	T	T	T	T	S	S				.	.	.	.	.	.	.	.	.	.	G	G	G		S						T	T	T	T	T			S	S	.	.								G	G	G	S
Template Predicted Secondary structure								.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.																				.	.
Template SS confidence
		155	.	.	.	.	160									.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.											.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.			.	.	.	.	.	.	210	.	.	.	.
		256	.	.	.													260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.			.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.		310	.	.	.	.	.	.	.	.
Predicted Secondary structure						.	.	.	.	.	.	.	.	.	.	.	.																													.	.																							.										.	.
Query SS confidence						.	.	.	.	.	.	.	.	.	.	.	.																													.	.																							.										.	.
Query Sequence		A	E	I	R	.	.	.	.	.	.	.	.	.	.	.	.	K	V	H	Q	Y	L	T	F	S	V	N	T	P	A	Q	L	A	L	A	D	M	L	R	A	E	P	E	H	.	.	Y	L	A	L	P	D	F	Y	R	Q	K	R	D	I	L	V	N	A	L	N	E	S	.	R	L	E	I	L	P	C	E	G	.	.
Query Conservation						.	.	.	.	.	.	.	.	.	.	.	.																													.	.																							.										.	.
Alig confidence						.	.	.	.	.	.	.	.	.	.	.	.																													.	.																							.										.	.
Template Conservation
Template Sequence		A	E	S	P	K	H	L	P	T	M	L	R	Y	D	T	Y	V	K	N	N	S	L	Y	N	T	P	P	S	F	G	I	Y	M	V	N	E	V	L	K	W	I	E	E	R	G	G	L	E	G	V	Q	Q	A	N	R	K	K	A	S	L	I	Y	D	A	I	D	Q	S	G	G	F	Y	R	G	C	V	D	V	D	S
Template Known Secondary structure		S	S			T	T	S		G	G	G								T	T	T		S	S																				T	T																						T	S	T	T	S	S			S	S		G	G	G
Template Predicted Secondary structure
Template SS confidence
		215	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.
				319	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370			.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.
Predicted Secondary structure		.	.																																																					.	.
Query SS confidence		.	.																																																					.	.
Query Sequence		.	.	T	Y	F	L	L	V	D	Y	S	A	V	S	T	L	D	D	V	E	F	C	Q	W	L	T	Q	E	H	G	V	A	A	I	P	L	S	V	F	C	A	D	P	F	P	H	K	L	I	R	L	C	F	A	.	.	K	K	E	S	T	L	L	A	A	A	E	R	L	R	Q	L
Query Conservation		.	.																																																					.	.
Alig confidence		.	.											.	.	.																									.	.	.	.	.	.										.	.
Template Conservation														.	.	.																									.	.	.	.	.	.
Template Sequence		R	S	D	M	N	I	T	F	R	L	A	S	.	.	.	E	E	L	E	K	E	F	V	K	A	S	E	Q	E	G	F	V	G	L	K	G	H	R	S	.	.	.	.	.	.	V	G	G	L	R	A	S	I	Y	N	A	V	P	Y	E	S	C	E	A	L	V	Q	F	M	E	H	F
Template Known Secondary structure		B		S	S							S		.	.	.														T	T			S		B			T	T	.	.	.	.	.	.	T		S							T	T	S
Template Predicted Secondary structure														.	.	.																									.	.	.	.	.	.
Template SS confidence
		295	.	.	.	.	300	.	.	.	.	.	.				.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330							.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions