Job Description P77806 Confidence 99.96% Date Thu Jan 5 12:33:00 GMT 2012 Rank 118 Aligned Residues 335 % Identity 15% Template d1vefa1 SCOP info PLP-dependent transferase-like PLP-dependent transferases GABA-aminotransferase-like Resolution 1.35

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		27	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.				.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.
Predicted Secondary structure																				.	.	.
Query SS confidence																				.	.	.
Query Sequence		A	Q	Q	H	Q	A	I	N	L	S	Q	G	F	P	D	F	D	G	.	.	.	P	R	Y	L	Q	E	R	L	A	H	H	V	A	Q	G	A	N	Q	Y	A	P	M	T	G	V	Q	A	L	R	E	A	I	A	Q	K	T	E	R	L	Y	G	Y	Q	P	D	A	D	S	D	I	T	V	T	A	G	A	T	E	A
Query Conservation																				.	.	.
Alig confidence																				.	.	.															.	.																												.	.	.
Template Conservation																																					.	.																												.	.	.
Template Sequence		A	E	G	N	E	Y	I	D	C	V	G	G	Y	G	V	A	N	L	G	H	G	N	P	E	V	V	E	A	V	K	R	Q	A	E	T	.	.	L	M	A	M	P	Q	T	L	P	T	P	M	R	G	E	F	Y	R	T	L	T	A	I	L	P	P	E	.	.	.	L	N	R	V	F	P	V	N	S	G	T	E	A
Template Known Secondary structure		T	T	S						S	S					T		T	T		B	T															.	.						T	T	S															T	S		T	T	.	.	.								S	S
Template Predicted Secondary structure																																					.	.																												.	.	.
Template SS confidence
		42	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.			.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.				.	.	.	.	.	.	110	.	.	.	.	.	.
		104	.	.	.	.	.	110	.	.	.			.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.								.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.
Predicted Secondary structure												.	.																										.	.	.	.	.	.	.
Query SS confidence												.	.																										.	.	.	.	.	.	.
Query Sequence		L	Y	A	A	I	T	A	L	V	R	.	.	N	G	D	E	V	I	C	F	D	P	S	Y	D	S	Y	A	P	A	I	A	L	S	G	G	I	.	.	.	.	.	.	.	V	K	R	M	A	L	Q	P	P	H	F	R	V	D	W	Q	E	F	A	A	L	L	S	E	R	T	R	L	V	I	L	N	T	P	H	N
Query Conservation												.	.																										.	.	.	.	.	.	.
Alig confidence												.	.																										.	.	.	.	.	.	.
Template Conservation
Template Sequence		N	E	A	A	L	K	F	A	R	A	H	T	G	R	K	K	F	V	A	A	M	R	G	F	S	G	R	T	M	G	S	L	S	V	T	W	E	P	K	Y	R	E	P	F	L	P	L	V	E	P	V	E	F	I	P	Y	N	D	V	E	A	L	K	R	A	V	D	E	E	T	A	A	V	I	L	E	P	V	Q	G
Template Known Secondary structure														S								T	T					S	S						T								G	G	G		S		S	S							T	T											T	T								S			T
Template Predicted Secondary structure
Template SS confidence
		117	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.
		175	.	.		.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.
Predicted Secondary structure					.
Query SS confidence					.
Query Sequence		P	S	A	.	T	V	W	Q	Q	A	D	F	A	A	L	W	Q	A	I	A	G	H	E	I	F	V	I	S	D	E	V	Y	E	H	I	N	F	S	Q	Q	G	H	A	S	V	L	A	H	P	Q	L	R	E	R	A	V	A	V	S	S	F	G	K	T	Y	H	M	T	G	W	K	V	G	Y	C	V	A	P	A	P
Query Conservation					.
Alig confidence					.																																									.	.	.	.	.																		.
Template Conservation																																														.	.	.	.	.																		.
Template Sequence		E	G	G	V	R	P	A	T	P	E	F	L	R	A	A	R	E	I	T	Q	E	K	G	A	L	L	I	L	D	E	I	Q	T	G	M	G	R	T	G	K	R	F	A	F	.	.	.	.	.	E	H	F	G	I	V	P	D	I	L	T	L	A	K	A	L	G	.	G	G	V	P	L	G	V	A	V	M	R	E	E
Template Known Secondary structure		T	T	T	S																			T								T	T	T	T	T	T	T	T	S	S	S	S	T		.	.	.	.	.				T				S						G	G	G	G	.	T	T	S	S
Template Predicted Secondary structure																																														.	.	.	.	.																		.
Template SS confidence
		197	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240						.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.		.	.	260	.	.	.	.	.	.	.	.	.	270
		254	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.			.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.
Predicted Secondary structure																																																															.	.
Query SS confidence																																																															.	.
Query Sequence		I	S	A	E	I	R	K	V	H	Q	Y	L	T	F	S	V	N	T	P	A	Q	L	A	L	A	D	M	L	R	A	E	P	E	H	Y	L	A	L	P	D	F	Y	R	Q	K	R	D	I	L	V	N	A	L	N	E	S	R	L	E	I	L	.	.	P	C	E	G	T	Y	F	L	L	V	D	Y	S	A	V	S	T
Query Conservation																																																															.	.
Alig confidence																															.	.																															.	.															.	.	.
Template Conservation																															.	.																																															.	.	.
Template Sequence		V	A	R	S	M	P	K	G	G	H	G	T	T	F	G	G	N	P	L	A	M	A	A	G	V	A	A	I	R	.	.	Y	L	E	R	T	R	L	W	E	R	A	A	E	L	G	P	W	F	M	E	K	L	R	A	I	P	S	P	K	I	R	E	V	R	G	M	G	L	M	V	G	L	E	L	K	E	.	.	.
Template Known Secondary structure					T	S		T	T	S	S			S	S	T	T														.	.						T	T																	T	S			T	T								T	T							S	S	.	.	.
Template Predicted Secondary structure																															.	.																																															.	.	.
Template SS confidence
		271	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.			300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.
		332	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.			.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.
Predicted Secondary structure																																						.	.
Query SS confidence																																						.	.
Query Sequence		L	D	D	V	E	F	C	Q	W	L	T	Q	E	H	G	V	A	A	I	P	L	S	V	F	C	A	D	P	F	P	H	K	L	I	R	L	.	.	C	F	A	K	K	E	S	T	L	L	A	A	A	E	R	L	R	Q	L
Query Conservation																																						.	.
Alig confidence		.																					.	.	.	.	.	.	.	.								.	.
Template Conservation		.																					.	.	.	.	.	.	.	.
Template Sequence		.	K	A	A	P	Y	I	A	R	L	E	K	E	H	R	V	L	A	L	Q	A	.	.	.	.	.	.	.	.	G	P	T	V	I	R	F	L	P	P	L	V	I	E	K	E	D	L	E	R	V	V	E	A	V	R	A	V
Template Known Secondary structure		.		S																		S	.	.	.	.	.	.	.	.	S	T	T								T	T
Template Predicted Secondary structure		.																					.	.	.	.	.	.	.	.
Template SS confidence
			346	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.									.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions