 |
Job Description | P77806 | Confidence | 23.52% | Date | Thu Jan 5 12:33:00 GMT 2012 |
Rank | 360 | Aligned Residues | 119 |
% Identity | 14% | Template | d1vb5a_ |
SCOP info | NagB/RpiA/CoA transferase-like
| NagB/RpiA/CoA transferase-like
| IF2B-like
|
Resolution | 2.20 |
|
 |
  |   |
71 | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | |
|
|
|
. | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  | . | . | . | . |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | L | R | E | A | I | A | Q | K | T | E | R | L | Y | G | Y | Q | P | D | A | D | S | D | I | T | V | T | A | G | A | T | E | A | L | Y | A | A | I | T | A | L | V | R | N | G | D | E | . |
. |
. |
. |
V | I | C | F | D | P | S | Y | D | S | Y | A | P | A | I | A | L | S | G | G | I | V | K | R | M | A | L | Q | P |
Query Conservation |   |
  |
|
|   |
|
|
|   |   |
|   |   |   |   |
|   |   |   |   |   |   |   |   |
|   |   |
|   |
|   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |
|
|   | . | . | . | . |
|
|
|   |   |
|   |
|   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |
|   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |   |   |
|   |   |   |
|   |   |   | . | . | . | . | . |
|   |   |   |   |   |
|
|
|   |   |   |
|   |
|
|   |   |   |
|   |   |
|   |   |   |
|
|   |   |   |
|   |
|   |
|
|
|
|   |   |
|
|   |   |
|
|   |   |
|   |   |   |
|
|   |
|
|   |
|   |
|
Template Sequence |   |
E | A | K | R | E | L | A | S | I | G | A | Q | L | . |
. |
. |
. |
. |
I | D | D | G | D | V | I | I | T | H | S | F | S | S | T | V | L | E | I | I | R | T | A | K | E | R | K | K | R | F | K | V | I | L | T | E | S | S | P | D | Y | E | G | L | H | L | A | R | E | L | E | F | S | G | I | E | F | E | V | I | T | D |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . |
|
| T | T |  |  |  |  |
|
| S |
|
|  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
|  |  |  |  |  |  |
|
| T | T | T | T |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
|  |  |  |  |
| G |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . |
|
|
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
94 | . | . | . | . | . | 100 | . | . | . | . | . | . | |
|
|
|
|
. | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . |
  |
  |   |
147 | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . |
Predicted Secondary structure |   |
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
P | H | F | R | V | D | W | Q | E | F | A | A | L | L | S | E | R | T | R | L | V | I | L | N | T | P | H | N | P | S | A | T | V | W | Q | Q | A | D | F | A | A | L | W | Q | A | I | A | G | H | E | I | F | V | I | S |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|
|   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |   |   |
|
|   |
Alig confidence |   |
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
| . | . | . | . | . | . | . |   |   |   |   |
|   |   |
|
|   |
|
|
|
|
|
|   |
|   |   |
|
|   |
|   |
|
|   |
|
|   |   |   |
|   |   |
|
|   |   |   |
|
|
|   |
|
Template Sequence |   |
A | Q | . |
. |
. |
. |
. |
. |
. |
M | G | L | F | C | R | E | A | S | I | A | I | V | G | A | D | M | I | T | K | D | G | Y | V | V | N | K | A | G | T | Y | L | L | A | L | A | C | H | E | N | A | I | P | F | Y | V |
Template Known Secondary structure |   |
G | G | . | . | . | . | . | . | . |  |  |  |  |  | T | T |
| S |  |  |  |  |
|
| S |  |  |
| T | T | S |
|  |  |  |  | T | T |  |  |  |  |  |  |  |  |  |  | T | T |
|
|  |  |  |
Template Predicted Secondary structure |   |
 |  | . | . | . | . | . | . | . |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
169 | 170 | |
|
|
|
|
|
|
. | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|