Return to main results Retrieve Phyre Job Id

Job DescriptionP77806
Confidence99.87%DateThu Jan 5 12:33:00 GMT 2012
Rank195Aligned Residues364
% Identity15%Templated1rv3a_
SCOP infoPLP-dependent transferase-like PLP-dependent transferases GABA-aminotransferase-like
Resolution2.40

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   7..10.........20......... 30.........40.........50.........60.. .......70........
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Query Sequence  IPQSKLPQLGTTIFTQMSALAQQ. HQAINLSQGFPDFDGPRYLQERLAHHVAQGANQ. . . . . . . YAPMTGVQALREAIAQ
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Template Sequence  MLAQPLKDSDAEVYDIIKKESNRQRVGLELIASEN. . FASRAVLEALGSCLNNKYSLGYPGQRYYGGTEHIDELETLCQK
Template Known Secondary structure  TTS

SS

TT

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TSGGGT



TTSSS

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   21........30.........40.........50..... ....60.........70.........80.........90........
 
   7980.........90.........100.........110.........120.........130...... ...140........
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Query Sequence  KTERLYGYQPDADSDITVTAGATEALYAAITALVRNGDEVICFDPSYDSYAPAIALSG. . . . . . . . . . GIVKRMALQPPH
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Template Sequence  RALQAYGLDPQCWGVNVQPYSGSPANFAVYTALVEPHGRIMGLDLPDGGHLTHGFMTDKKKISATSIFFESMAYKVNPDT
Template Known Secondary structure  TT

TTT


SST
TT

GGGT

GGG

B
SS
B
SS
B
TTT
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   99100.........110.........120.........130.........140.........150.........160.........170........
 
   149150.........160.........170.........180.........190.........200.........210.........220........
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Query Sequence  FRVDWQEFAALLSERTRLVILNTPHNPSATVWQQADFAALWQAIAGHEIFVISDEVYEHINFSQQGHASVLAHPQLRERA
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Template Sequence  GYIDYDRLEENARLFHPKLIIAGTSCYS. . . . RNLDYGRLRKIADENGAYLMADMAHISGLVVAGVVPSPFEHCH. . . . .
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SB


S

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TT

TTTTSS

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   179180.........190.........200...... ...210.........220.........230.........240.........
 
   229230.........240.........250... ......260.........270.........280... ......290........
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Query Sequence  VAVSSFGKTYHMTGWKVGYCVAPAP. . . . . . . . . ISAEIRKVHQYLTFSVNTPAQLALADMLRA. EPEHYLALPDFYRQK
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Template Sequence  VVTTTTHKTL. . RGCRAGMIFYRRGVRSEILYNLESLINSAVFPGLQGGPHNHAIAGVAVALKQAMTPEFKEYQRQVVAN
Template Known Secondary structure  SSGGG..


S

SB



B

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   250......... 260.........270.........280.........290.........300.........310.........320.......
 
   299300.........310....... ..320.........330.........340.........350...... ...360......... 370
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Query Sequence  RDILVNALNESRLEILPCE. GTYFLLVDYSAVSTLDDVEFCQWLTQEHGVAAIPLSVFC. ADPFPHKLIRLCF. . . . . . A
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Template Sequence  CRALSAALVELGYKIVTGGSDNHLILVDLRS. KGTDGGRAEKVL. EACSIACNKNTCPGDKSALRPSGLRLGTPALTSRG
Template Known Secondary structure  TT
GGGS
SSSGGG.GT

.TT


SS
S
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TT
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   335....340.........350.........360..... ....370....... ..380.........390.........400.........410..
 
   371........380.....
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Query Sequence  KKESTLLAAAERLRQ
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Template Sequence  LLEKDFQKVAHFIHR
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   413......420.......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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