Job Description P77806 Confidence 99.91% Date Thu Jan 5 12:33:00 GMT 2012 Rank 170 Aligned Residues 311 % Identity 12% Template d1o69a_ SCOP info PLP-dependent transferase-like PLP-dependent transferases GABA-aminotransferase-like Resolution 1.84

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		49	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.			.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.		.	.	.	.	.	.	.	.	120	.	.	.	.	.
Predicted Secondary structure																						.	.																																												.
Query SS confidence																						.	.																																												.
Query Sequence		Q	E	R	L	A	H	H	V	A	Q	G	A	N	Q	Y	A	P	M	T	G	.	.	V	Q	A	L	R	E	A	I	A	Q	K	T	E	R	L	Y	G	Y	Q	P	D	A	D	S	D	I	T	V	T	A	G	A	T	E	A	L	Y	A	A	I	T	A	L	.	V	R	N	G	D	E	V	I	C	F	D	P	S	Y
Query Conservation																						.	.																																												.
Alig confidence												.	.	.								.	.																.	.	.	.	.	.	.	.	.																				.
Template Conservation												.	.	.																									.	.	.	.	.	.	.	.	.
Template Sequence		L	K	Y	I	E	E	V	F	K	S	.	.	.	N	Y	I	A	P	L	G	E	F	V	N	R	F	E	Q	S	V	K	D	Y	S	K	S	E	.	.	.	.	.	.	.	.	.	N	A	L	A	L	N	S	A	T	A	A	L	H	L	A	L	R	V	A	G	V	K	Q	D	D	I	V	L	A	S	S	F	T	F
Template Known Secondary structure												.	.	.	T	T	T	S		T	T																	S	.	.	.	.	.	.	.	.	.						S													T	T			T	T							S	S	S
Template Predicted Secondary structure												.	.	.																									.	.	.	.	.	.	.	.	.
Template SS confidence
		15	.	.	.	.	20	.	.	.	.				.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.										.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		126	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	S	Y	A	P	A	I	A	L	S	G	G	I	V	K	R	M	A	L	Q	P	P	H	F	R	V	D	W	Q	E	F	A	A	L	L	S	E	R	T	R	L	V	I	L	N	T	P	H	N	P	S	A	T	V	W	Q	Q	A	D	F	A	A	L	W	Q	A	I	A	G	H	E	I	F	V	I	S	D	E	V	Y
Query Conservation
Alig confidence																									.																																	.	.	.
Template Conservation																									.																																	.	.	.
Template Sequence		I	A	S	V	A	P	I	C	Y	L	K	A	K	P	V	F	I	D	C	D	E	T	Y	.	N	I	D	V	D	L	L	K	L	A	I	K	E	C	E	K	K	P	K	A	L	I	L	T	H	L	Y	G	N	A	A	K	.	.	.	M	D	E	I	V	E	I	C	K	E	N	D	I	V	L	I	E	D	A	A	E
Template Known Secondary structure		G	G	G	T						T	T								B		T	T	S	.	S	B													S	S										G	G	G					.	.	.											T	T								T	T
Template Predicted Secondary structure																									.																																	.	.	.
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.		.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.				.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
		206	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270															.
Predicted Secondary structure																																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	H	I	N	F	S	Q	Q	G	H	A	S	V	L	A	H	P	Q	L	R	E	R	A	V	A	V	S	S	F	G	K	T	Y	H	M	T	G	W	K	V	G	Y	C	V	A	P	A	P	I	S	A	E	I	R	K	V	H	Q	Y	L	T	F	S	V	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T
Query Conservation																																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence										.	.	.	.	.																						.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation										.	.	.	.	.																						.
Template Sequence		A	L	G	S	F	Y	K	N	.	.	.	.	.	K	A	L	G	T	F	G	E	F	G	V	Y	S	Y	N	G	N	K	I	I	T	.	T	S	G	G	G	M	L	I	G	K	N	K	E	K	I	E	K	A	R	F	Y	S	T	Q	A	R	E	N	C	L	H	Y	E	H	L	D	Y	G	Y	N	Y	R	L	S	N
Template Known Secondary structure			T	T				T	T	.	.	.	.	.			T	T	S	S	S	S								T	T	S	S	S		.		S	S							S												T	B	T				S	S	S	S				S	S				B		B
Template Predicted Secondary structure										.	.	.	.	.																						.
Template SS confidence
		159	160	.	.	.	.	.	.						.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.		.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.
		272	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.																			.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.
Predicted Secondary structure																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		P	A	Q	L	A	L	A	D	M	L	R	A	E	P	E	H	Y	L	A	L	P	D	F	Y	R	Q	K	R	D	I	L	V	N	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	N	E	S	R	L	E	I	L	P	C	E	G	T	Y	F	L	L	V	D	Y	S	A	V	S	T	L	D
Query Conservation																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	L	G	A	I	G	V	A	Q	M	E	V	L	E	Q	R	V	L	K	K	R	E	I	Y	E	W	Y	K	E	F	L	G	E	Y	F	S	F	L	D	E	L	E	N	S	R	S	N	R	W	L	S	T	A	L	I	N	F	D	K	N	E	L	N	A	C	Q	K	D	I	N	I	S	Q	K	N	I	T	L	H	P
Template Known Secondary structure												T	T																				T	T	T								T	T						S	S						S			G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		233	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.
		334	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.																						.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.			.	.	.	.	.	.	.	.	380	.	.	.	.	.	.
Predicted Secondary structure																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.
Query SS confidence																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.
Query Sequence		D	V	E	F	C	Q	W	L	T	Q	E	H	G	V	A	A	I	P	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	V	F	C	A	D	P	F	P	H	K	L	I	R	L	C	F	A	K	.	.	K	E	S	T	L	L	A	A	A	E	R	L	R	Q	L
Query Conservation																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.
Alig confidence																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					.	.	.	.	.											.	.
Template Conservation																																														.	.	.	.	.
Template Sequence		K	I	S	K	L	I	E	D	L	K	N	K	Q	I	E	T	R	P	L	W	K	A	M	H	T	Q	E	V	F	K	G	A	K	A	Y	L	N	G	N	S	E	L	F	F	.	.	.	.	.	Q	K	G	I	C	L	P	S	G	T	A	M	S	K	D	D	V	Y	E	I	S	K	L	I	L	K	S
Template Known Secondary structure													T	T				B						G	G	G		G	G	G	T	T							S							.	.	.	.	.										T	T
Template Predicted Secondary structure																																														.	.	.	.	.
Template SS confidence
		313	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.						.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions