Job Description P77806 Confidence 99.96% Date Thu Jan 5 12:33:00 GMT 2012 Rank 121 Aligned Residues 324 % Identity 16% Template d1mdoa_ SCOP info PLP-dependent transferase-like PLP-dependent transferases GABA-aminotransferase-like Resolution 1.70

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		37	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.		.	.	.	.
Predicted Secondary structure																																																																													.
Query SS confidence																																																																													.
Query Sequence		Q	G	F	P	D	F	D	G	P	R	Y	L	Q	E	R	L	A	H	H	V	A	Q	G	A	N	Q	Y	A	P	M	T	G	V	Q	A	L	R	E	A	I	A	Q	K	T	E	R	L	Y	G	Y	Q	P	D	A	D	S	D	I	T	V	T	A	G	A	T	E	A	L	Y	A	A	I	T	A	L	.	V	R	N	G
Query Conservation																																																																													.
Alig confidence									.	.															.	.																							.	.	.	.	.	.	.	.	.																				.
Template Conservation									.	.															.	.																							.	.	.	.	.	.	.	.	.
Template Sequence		F	S	R	P	A	X	G	.	.	A	E	E	L	A	A	V	K	T	V	L	D	S	G	.	.	W	I	T	T	G	P	K	N	Q	E	L	E	A	A	F	C	R	L	T	G	N	Q	.	.	.	.	.	.	.	.	.	Y	A	V	A	V	S	S	A	T	A	G	X	H	I	A	L	X	A	L	G	I	G	E	G
Template Known Secondary structure		S							.	.														T	.	.			S	S	S																	S	.	.	.	.	.	.	.	.	.						S													T	T			T	T
Template Predicted Secondary structure									.	.															.	.																							.	.	.	.	.	.	.	.	.
Template SS confidence
		13	.	.	.	.	.	.			20	.	.	.	.	.	.	.	.	.	30	.	.	.			.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.										.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
		116	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	E	V	I	C	F	D	P	S	Y	D	S	Y	A	P	A	I	A	L	S	G	G	I	V	K	R	M	A	L	Q	P	P	H	F	R	V	D	W	Q	E	F	A	A	L	L	S	E	R	T	R	L	V	I	L	N	T	P	H	N	P	S	A	T	V	W	Q	Q	A	D	F	A	A	L	W	Q	A	I	A	G	H
Query Conservation
Alig confidence																																																					.	.	.													.	.	.
Template Conservation																																																					.	.	.													.	.	.
Template Sequence		D	E	V	I	T	P	S	X	T	W	V	S	T	L	N	X	I	V	L	L	G	A	N	P	V	X	V	D	V	D	R	D	T	L	X	V	T	P	E	H	I	E	A	A	I	T	P	Q	T	K	A	.	.	.	I	I	P	V	H	Y	A	G	A	P	A	D	.	.	.	L	D	A	I	Y	A	L	G	E	R	Y
Template Known Secondary structure								S	S	S											T	T								B		T	T	T			B											T	T				.	.	.				B		G	G	G					.	.	.
Template Predicted Secondary structure																																																					.	.	.													.	.	.
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130				.	.	.	.	.	.	.	.	.	140	.	.				.	.	.	.	.	.	.	150	.	.	.
		196	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.										.	.
Predicted Secondary structure																																																																							.	.	.	.	.	.	.	.	.
Query SS confidence																																																																							.	.	.	.	.	.	.	.	.
Query Sequence		E	I	F	V	I	S	D	E	V	Y	E	H	I	N	F	S	Q	Q	G	H	A	S	V	L	A	H	P	Q	L	R	E	R	A	V	A	V	S	S	F	G	K	T	Y	H	M	T	G	W	K	V	G	Y	C	V	A	P	A	P	I	S	A	E	I	R	K	V	H	Q	Y	.	.	.	.	.	.	.	.	.	L	T
Query Conservation																																																																							.	.	.	.	.	.	.	.	.
Alig confidence														.	.	.	.	.	.																											.																									.	.	.	.	.	.	.	.	.
Template Conservation														.	.	.	.	.	.																											.
Template Sequence		G	I	P	V	I	E	D	A	A	H	A	T	.	.	.	.	.	.	G	T	S	Y	K	G	R	H	I	G	A	R	G	T	A	I	F	S	F	H	A	I	K	N	I	T	.	C	A	E	G	G	I	V	V	T	D	N	P	Q	F	A	D	K	L	R	S	L	K	F	H	G	L	G	V	D	Q	A	E	V	L	A
Template Known Secondary structure		T			B					T	T		T	.	.	.	.	.	.	T				T	T			T	T	S	S	S								T	T	S	S	S		.	S	S	S							S												T	B	T	T									S	S
Template Predicted Secondary structure														.	.	.	.	.	.																											.
Template SS confidence
		154	.	.	.	.	.	160	.	.	.	.	.							.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.		.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.
		267	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.		310	.	.	.	.	.	.	.	.	.	320	.						.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340
Predicted Secondary structure																																													.													.	.	.	.	.
Query SS confidence																																													.													.	.	.	.	.
Query Sequence		F	S	V	N	T	P	A	Q	L	A	L	A	D	M	L	R	A	E	P	E	H	Y	L	A	L	P	D	F	Y	R	Q	K	R	D	I	L	V	N	A	L	N	E	S	.	R	L	E	I	L	P	C	E	G	T	Y	F	.	.	.	.	.	L	L	V	D	Y	S	A	V	S	T	L	D	D	V	E	F	C	Q	W
Query Conservation																																													.													.	.	.	.	.
Alig confidence																																													.													.	.	.	.	.
Template Conservation
Template Sequence		P	G	Y	K	Y	N	L	P	D	L	N	A	A	I	A	L	A	Q	L	Q	K	L	D	A	L	N	A	R	R	A	A	I	A	A	Q	Y	H	Q	A	X	A	D	L	P	F	Q	P	L	S	L	P	S	W	E	H	I	H	A	W	H	L	F	I	I	R	V	D	E	A	R	C	G	I	T	R	D	A	L	X	A
Template Known Secondary structure					B																	T																					T	S	S								S	S							S												S	S
Template Predicted Secondary structure
Template SS confidence
		238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.
		341	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.																		.	360	.	.	.	.	.	.	.	.	.	370			.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.
Predicted Secondary structure																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.
Query SS confidence																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.
Query Sequence		L	T	Q	E	H	G	V	A	A	I	P	L	S	V	F	C	A	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	F	P	H	K	L	I	R	L	C	F	A	.	.	K	K	E	S	T	L	L	A	A	A	E	R	L	R	Q	L
Query Conservation																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.
Alig confidence																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.
Template Conservation
Template Sequence		S	L	K	T	K	G	I	G	T	G	L	H	F	R	A	A	H	T	Q	K	Y	Y	R	E	R	F	P	T	L	T	L	P	D	T	E	W	N	S	E	R	I	C	S	L	P	L	F	P	D	X	T	E	S	D	F	D	R	V	I	T	A	L	H	Q	I
Template Known Secondary structure						T	T	B			B						G	G	G	S							S	T	T											T	T								T	T
Template Predicted Secondary structure
Template SS confidence
		318	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions