Job Description P77806 Confidence 100.00% Date Thu Jan 5 12:33:00 GMT 2012 Rank 41 Aligned Residues 356 % Identity 21% Template d1m7ya_ SCOP info PLP-dependent transferase-like PLP-dependent transferases GABA-aminotransferase-like Resolution 1.60

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		27	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.													.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.			.	.	.	.	90	.	.
Predicted Secondary structure																																					.	.	.	.	.	.	.	.	.	.	.	.																									.	.
Query SS confidence																																					.	.	.	.	.	.	.	.	.	.	.	.																									.	.
Query Sequence		A	Q	Q	H	Q	A	I	N	L	S	Q	G	F	P	D	F	D	G	P	R	Y	L	Q	E	R	L	A	H	H	V	A	Q	G	A	N	.	.	.	.	.	.	.	.	.	.	.	.	Q	Y	A	P	M	T	G	V	Q	A	L	R	E	A	I	A	Q	K	T	E	R	L	Y	G	.	.	Y	Q	P	D	A	D	S
Query Conservation																																					.	.	.	.	.	.	.	.	.	.	.	.																									.	.
Alig confidence																		.																			.	.	.	.	.	.	.	.	.	.	.	.																									.	.							.
Template Conservation																		.																																																															.
Template Sequence		H	N	T	N	G	I	I	Q	M	G	L	A	E	N	Q	L	.	C	F	D	L	L	E	S	W	L	A	K	N	P	E	A	A	A	F	K	K	N	G	E	S	I	F	A	E	L	A	L	F	Q	D	Y	H	G	L	P	A	F	K	K	A	M	V	D	F	M	A	E	I	R	G	N	K	V	T	F	D	P	N	.
Template Known Secondary structure		S		T	T	S	B				S	S					S	.														T	G	G	G	T			T	T													T	T																	T	T	T	S	S				G	G	.
Template Predicted Secondary structure																		.																																																															.
Template SS confidence
		35	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50		.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.
		93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.		.	.	.	.	140	.	.	.	.	.		.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.							.	.	.
Predicted Secondary structure																																													.											.																	.	.	.	.	.	.
Query SS confidence																																													.											.																	.	.	.	.	.	.
Query Sequence		D	I	T	V	T	A	G	A	T	E	A	L	Y	A	A	I	T	A	L	V	R	N	G	D	E	V	I	C	F	D	P	S	Y	D	S	Y	A	P	A	I	A	L	S	.	G	G	I	V	K	R	M	A	L	Q	.	P	P	H	F	R	V	D	W	Q	E	F	A	A	L	L	S	.	.	.	.	.	.	E	R	T
Query Conservation																																													.											.																	.	.	.	.	.	.
Alig confidence																																													.											.																	.	.	.	.	.	.
Template Conservation
Template Sequence		H	L	V	L	T	A	G	A	T	S	A	N	E	T	F	I	F	C	L	A	D	P	G	E	A	V	L	I	P	T	P	Y	Y	P	G	F	D	R	D	L	K	W	R	T	G	V	E	I	V	P	I	H	C	T	S	S	N	G	F	Q	I	T	E	T	A	L	E	E	A	Y	Q	E	A	E	K	R	N	L	R	V
Template Known Secondary structure		G																					T	T								S			T	T					T	T	T	T	T											G	G	G	T	S																	T	T
Template Predicted Secondary structure
Template SS confidence
		113	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.										.	.	.	.	230	.	.	.	.	.
Predicted Secondary structure																																																															.	.	.	.	.	.	.	.	.
Query SS confidence																																																															.	.	.	.	.	.	.	.	.
Query Sequence		R	L	V	I	L	N	T	P	H	N	P	S	A	T	V	W	Q	Q	A	D	F	A	A	L	W	Q	A	I	A	G	H	E	I	F	V	I	S	D	E	V	Y	E	H	I	N	F	S	Q	Q	G	H	A	S	V	L	A	H	P	Q	L	R	.	.	.	.	.	.	.	.	.	E	R	A	V	A	V	S	S	F	G
Query Conservation																																																															.	.	.	.	.	.	.	.	.
Alig confidence																																																															.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	G	V	L	V	T	N	P	S	N	P	L	G	T	T	M	T	R	N	E	L	Y	L	L	L	S	F	V	E	D	K	G	I	H	L	I	S	D	E	I	Y	S	G	T	A	F	S	S	P	S	F	I	S	V	M	E	V	L	K	D	R	N	C	D	E	N	S	E	V	W	Q	R	V	H	V	V	Y	S	L	S
Template Known Secondary structure								S	S		T	T	T																				T								T	T	G	G	G			S	S	S									T	T	T	T	T		S	S	S	S	S	G	G	G	G							S	S
Template Predicted Secondary structure
Template SS confidence
		193	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.
		236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.			.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.
Predicted Secondary structure																																																			.	.
Query SS confidence																																																			.	.
Query Sequence		K	T	Y	H	M	T	G	W	K	V	G	Y	C	V	A	P	A	P	I	S	A	E	I	R	K	V	H	Q	Y	L	T	F	S	V	N	T	P	A	Q	L	A	L	A	D	M	L	R	A	E	.	.	P	E	H	Y	L	A	L	P	D	F	Y	R	Q	K	R	D	I	L	V	N	A	L	N	E	S	R	L	E	I
Query Conservation																																																			.	.
Alig confidence																																																			.	.
Template Conservation
Template Sequence		K	D	L	G	L	P	G	F	R	V	G	A	I	Y	S	N	D	D	M	V	V	A	A	A	T	K	M	S	S	F	G	L	V	S	S	Q	T	Q	H	L	L	S	A	M	L	S	D	K	K	L	T	K	N	Y	I	A	E	N	H	K	R	L	K	Q	R	Q	K	K	L	V	S	G	L	Q	K	S	G	I	S	C
Template Known Secondary structure		S	S	S			G	G	G								S												G	G	G	S																																												T	T	T
Template Predicted Secondary structure
Template SS confidence
		273	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.
		314	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.					.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.		.	.	.	.	.	.	.	.	380	.	.	.	.	.	.
Predicted Secondary structure																						.	.	.	.																																							.
Query SS confidence																						.	.	.	.																																							.
Query Sequence		L	P	C	E	G	T	Y	F	L	L	V	D	Y	S	A	V	S	T	L	D	.	.	.	.	D	V	E	F	C	Q	W	L	T	Q	E	H	G	V	A	A	I	P	L	S	V	F	C	A	D	P	F	P	H	K	L	I	R	L	C	F	A	K	.	K	E	S	T	L	L	A	A	A	E	R	L	R	Q	L
Query Conservation																						.	.	.	.																																							.
Alig confidence																						.	.	.	.																											.	.											.
Template Conservation																																																				.	.
Template Sequence		L	N	G	N	A	G	L	F	C	W	V	D	M	R	H	L	L	R	S	N	T	F	E	A	E	M	E	L	W	K	K	I	V	Y	E	V	H	L	N	I	S	P	G	S	S	C	H	C	T	E	.	.	P	G	W	F	R	V	C	F	A	N	L	P	E	R	T	L	D	L	A	M	Q	R	L	K	A	F
Template Known Secondary structure						S	S	S							G	G	G	S	S	S	S	S														T	S							G	G	G	G	T		S	S	.	.	T	T							S	S	S
Template Predicted Secondary structure																																																				.	.
Template SS confidence
		353	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.			.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions