Job Description P77806 Confidence 99.97% Date Thu Jan 5 12:33:00 GMT 2012 Rank 107 Aligned Residues 359 % Identity 15% Template d1kl1a_ SCOP info PLP-dependent transferase-like PLP-dependent transferases GABA-aminotransferase-like Resolution 1.93

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.								.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure																						.																																	.	.	.	.	.	.	.
Query SS confidence																						.																																	.	.	.	.	.	.	.
Query Sequence		S	K	L	P	Q	L	G	T	T	I	F	T	Q	M	S	A	L	A	Q	Q	.	H	Q	A	I	N	L	S	Q	G	F	P	D	F	D	G	P	R	Y	L	Q	E	R	L	A	H	H	V	A	Q	G	A	N	.	.	.	.	.	.	.	Q	Y	A	P	M	T	G	V	Q	A	L	R	E	A	I	A	Q	K	T	E
Query Conservation																						.																																	.	.	.	.	.	.	.
Alig confidence																						.												.	.																				.	.	.	.	.	.	.
Template Conservation																																		.	.
Template Sequence		K	Y	L	P	Q	Q	D	P	Q	V	F	A	A	I	E	Q	E	R	K	R	Q	H	A	K	I	E	L	I	A	S	E	N	.	.	F	V	S	R	A	V	M	E	A	Q	G	S	V	L	T	N	K	Y	A	E	G	Y	P	G	R	R	Y	Y	G	G	C	E	Y	V	D	I	V	E	E	L	A	R	E	R	A	K
Template Known Secondary structure																									S					T	T			.	.											T	S	G	G	G	G							T	T			S	S	S
Template Predicted Secondary structure																																		.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.			.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.						.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
Predicted Secondary structure																																																									.	.	.	.	.
Query SS confidence																																																									.	.	.	.	.
Query Sequence		R	L	Y	G	Y	Q	P	D	A	D	S	D	I	T	V	T	A	G	A	T	E	A	L	Y	A	A	I	T	A	L	V	R	N	G	D	E	V	I	C	F	D	P	S	Y	D	S	Y	A	P	A	I	A	L	S	G	.	.	.	.	.	G	I	V	K	R	M	A	L	Q	P	P	H	F	R	V	D	W	Q	E	F
Query Conservation																																																									.	.	.	.	.
Alig confidence							.	.	.	.																																															.	.	.	.	.
Template Conservation							.	.	.	.
Template Sequence		Q	L	F	G	A	.	.	.	.	E	H	A	N	V	Q	P	H	S	G	A	Q	A	N	M	A	V	Y	F	T	V	L	E	H	G	D	T	V	L	G	M	N	L	S	H	G	G	H	L	T	H	G	S	P	V	N	F	S	G	V	Q	Y	N	F	V	A	Y	G	V	D	P	E	T	H	V	I	D	Y	D	D	V
Template Known Secondary structure							.	.	.	.	S							S	S															T	T								G	G	G	T			G	G	G	T		T	T	S						S							B		T	T	T		S	B
Template Predicted Secondary structure							.	.	.	.
Template SS confidence
		80	.	.	.	.					.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	A	L	L	S	E	R	T	R	L	V	I	L	N	T	P	H	N	P	S	A	T	V	W	Q	Q	A	D	F	A	A	L	W	Q	A	I	A	G	H	E	I	F	V	I	S	D	E	V	Y	E	H	I	N	F	S	Q	Q	G	H	A	S	V	L	A	H	P	Q	L	R	E	R	A	V	A	V	S	S	F	G	K
Query Conservation
Alig confidence																									.	.	.	.																																									.	.	.	.	.	.	.
Template Conservation																									.	.	.	.																																									.	.	.	.	.	.	.
Template Sequence		R	E	K	A	R	L	H	R	P	K	L	I	V	A	A	A	S	A	Y	P	R	I	I	.	.	.	.	D	F	A	K	F	R	E	I	A	D	E	V	G	A	Y	L	M	V	D	M	A	H	I	A	G	L	V	A	A	G	L	H	P	N	P	V	P	Y	A	H	.	.	.	.	.	.	.	F	V	T	T	T	T
Template Known Secondary structure											S							S	S			S			.	.	.	.													T								T	T	T						T	T	S	S			S	T	T	T		S	.	.	.	.	.	.	.						S
Template Predicted Secondary structure																									.	.	.	.																																									.	.	.	.	.	.	.
Template SS confidence
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.					.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.								.	220	.	.	.	.
		237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.			.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.
Predicted Secondary structure																																										.	.
Query SS confidence																																										.	.
Query Sequence		T	Y	H	M	T	G	W	K	V	G	Y	C	V	A	P	A	P	I	S	A	E	I	R	K	V	H	Q	Y	L	T	F	S	V	N	T	P	A	Q	L	A	.	.	L	A	D	M	L	R	A	E	P	E	H	Y	L	A	L	P	D	F	Y	R	Q	K	R	D	I	L	V	N	A	L	N	E	S	R	L	E	I	L
Query Conservation																																										.	.
Alig confidence																																										.	.
Template Conservation
Template Sequence		H	K	T	L	R	G	P	R	G	G	M	I	L	C	Q	E	Q	F	A	K	Q	I	D	K	A	I	F	P	G	I	Q	G	G	P	L	M	H	V	I	A	A	K	A	V	A	F	G	E	A	L	Q	D	D	F	K	A	Y	A	K	R	V	V	D	N	A	K	R	L	A	S	A	L	Q	N	E	G	F	T	L	V
Template Known Secondary structure		S	S	T	T				S																			T	T	T	T		S	S																		S																								T	T				G
Template Predicted Secondary structure
Template SS confidence
		225	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.
		315	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.			.	.	.	360	.	.	.	.	.	.	.	.	.	370							.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.
Predicted Secondary structure																																												.	.															.	.	.	.	.	.
Query SS confidence																																												.	.															.	.	.	.	.	.
Query Sequence		P	C	E	G	T	Y	F	L	L	V	D	Y	S	A	V	S	T	L	D	D	V	E	F	C	Q	W	L	T	Q	E	H	G	V	A	A	I	P	L	S	V	F	C	.	.	A	D	P	F	P	H	K	L	I	R	L	C	F	A	.	.	.	.	.	.	K	K	E	S	T	L	L	A	A	A	E	R	L	R	Q	L
Query Conservation																																												.	.															.	.	.	.	.	.
Alig confidence																													.															.	.															.	.	.	.	.	.
Template Conservation																													.
Template Sequence		S	G	G	T	D	N	H	L	L	L	V	D	L	R	P	Q	Q	L	T	G	K	T	A	E	K	V	L	.	D	E	V	G	I	T	V	N	K	N	T	I	P	Y	D	P	E	S	P	F	V	T	S	G	I	R	I	G	T	A	A	V	T	T	R	G	F	G	L	E	E	M	D	E	I	A	A	I	I	G	L	V
Template Known Secondary structure		G	G	S		S	S	S							G	G	G	T											.				T									T	T		S	S		T	T	T		S												T	T
Template Predicted Secondary structure																													.
Template SS confidence
		305	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.		.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions