Job Description P77806 Confidence 100.00% Date Thu Jan 5 12:33:00 GMT 2012 Rank 39 Aligned Residues 372 % Identity 17% Template d1iaya_ SCOP info PLP-dependent transferase-like PLP-dependent transferases GABA-aminotransferase-like Resolution 2.70

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		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30									.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60								.	.	.	.	.	.	.	.	.	70	.	.	.	.
Predicted Secondary structure																							.	.	.	.	.	.	.	.																															.	.	.	.	.	.	.
Query SS confidence																							.	.	.	.	.	.	.	.																															.	.	.	.	.	.	.
Query Sequence		S	K	L	P	Q	L	G	T	T	I	F	T	Q	M	S	A	L	A	Q	Q	H	.	.	.	.	.	.	.	.	Q	A	I	N	L	S	Q	G	F	P	D	F	D	G	P	R	Y	L	Q	E	R	L	A	H	H	V	A	Q	G	A	.	.	.	.	.	.	.	N	Q	Y	A	P	M	T	G	V	Q	A	L	R	E
Query Conservation																							.	.	.	.	.	.	.	.																															.	.	.	.	.	.	.
Alig confidence																							.	.	.	.	.	.	.	.													.																		.	.	.	.	.	.	.
Template Conservation																																											.
Template Sequence		S	K	L	A	T	N	E	S	P	Y	F	D	G	W	K	A	Y	D	S	D	P	F	H	P	L	K	N	P	N	G	V	I	Q	M	G	L	A	E	N	Q	L	.	C	L	D	L	I	E	D	W	I	K	R	N	P	K	G	S	I	C	S	S	F	K	A	I	A	N	F	Q	D	Y	H	G	L	P	E	F	R	K
Template Known Secondary structure			T	T	G	G	G				T	T									S	B			S	S	S	S	T	T	S	B				S	S					S	.	S												T	T	S	S	T	T												T	T
Template Predicted Secondary structure																																											.
Template SS confidence
		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.		.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
		75	.	.	.	.	80	.	.	.	.	.			.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.		.	.	.	140	.	.	.	.	.	.	.	.		.	150
Predicted Secondary structure													.	.																																																				.													.
Query SS confidence													.	.																																																				.													.
Query Sequence		A	I	A	Q	K	T	E	R	L	Y	G	.	.	Y	Q	P	D	A	D	S	D	I	T	V	T	A	G	A	T	E	A	L	Y	A	A	I	T	A	L	V	R	N	G	D	E	V	I	C	F	D	P	S	Y	D	S	Y	A	P	A	I	A	L	S	G	.	G	I	V	K	R	M	A	L	Q	P	P	H	.	F	R
Query Conservation													.	.																																																				.													.
Alig confidence													.	.							.																																													.													.
Template Conservation																					.
Template Sequence		A	I	A	K	F	M	E	K	T	R	G	G	R	V	R	F	D	P	E	.	R	V	V	M	A	G	G	A	T	G	A	N	E	T	I	I	F	C	L	A	D	P	G	D	A	F	L	V	P	S	P	Y	Y	P	A	F	N	R	D	L	R	W	R	T	G	V	Q	L	I	P	I	H	C	E	S	S	N	N	F	K
Template Known Secondary structure											T	T	T		S				T	T	.	S																					T	T							S	S			T	T					T	T	T	T	T											T	T	T	T	T
Template Predicted Secondary structure																					.
Template SS confidence
		101	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.		120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.
		151	.	.	.	.	.	.	.	.	160	.	.							.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
Predicted Secondary structure														.	.	.	.	.	.
Query SS confidence														.	.	.	.	.	.
Query Sequence		V	D	W	Q	E	F	A	A	L	L	S	E	.	.	.	.	.	.	R	T	R	L	V	I	L	N	T	P	H	N	P	S	A	T	V	W	Q	Q	A	D	F	A	A	L	W	Q	A	I	A	G	H	E	I	F	V	I	S	D	E	V	Y	E	H	I	N	F	S	Q	Q	G	H	A	S	V	L	A	H	P	Q	L
Query Conservation														.	.	.	.	.	.
Alig confidence														.	.	.	.	.	.
Template Conservation
Template Sequence		I	T	S	K	A	V	K	E	A	Y	E	N	A	Q	K	S	N	I	K	V	K	G	L	I	L	T	N	P	S	N	P	L	G	T	T	L	D	K	D	T	L	K	S	V	L	S	F	T	N	Q	H	N	I	H	L	V	C	D	E	I	Y	A	A	T	V	F	D	T	P	Q	F	V	S	I	A	E	I	L	D	E
Template Known Secondary structure																	T	T										S	S		T	T	T																		T	T	T								T	T	G	G	G			S	S	S										T	S
Template Predicted Secondary structure
Template SS confidence
		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.
		225								.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.			.	.	.	.	.	290	.	.	.	.	.
Predicted Secondary structure			.	.	.	.	.	.	.																																																												.	.
Query SS confidence			.	.	.	.	.	.	.																																																												.	.
Query Sequence		R	.	.	.	.	.	.	.	E	R	A	V	A	V	S	S	F	G	K	T	Y	H	M	T	G	W	K	V	G	Y	C	V	A	P	A	P	I	S	A	E	I	R	K	V	H	Q	Y	L	T	F	S	V	N	T	P	A	Q	L	A	L	A	D	M	L	R	A	E	.	.	P	E	H	Y	L	A	L	P	D	F	Y
Query Conservation			.	.	.	.	.	.	.																																																												.	.
Alig confidence			.	.	.	.	.	.	.																																																												.	.
Template Conservation
Template Sequence		Q	E	M	T	Y	C	N	K	D	L	V	H	I	V	Y	S	L	S	K	D	M	G	L	P	G	F	R	V	G	I	I	Y	S	F	N	D	D	V	V	N	C	A	R	K	M	S	S	F	G	L	V	S	T	Q	T	Q	Y	F	L	A	A	M	L	S	D	E	K	F	V	D	N	F	L	R	E	S	A	M	R	L
Template Known Secondary structure		G	G	G	T	T	S		T	T	S							S	T	T	T	S	S		G	G	G								S													T	T	S														T	T
Template Predicted Secondary structure
Template SS confidence
		260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.
		296	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.					.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.
Predicted Secondary structure																																							.	.	.	.
Query SS confidence																																							.	.	.	.
Query Sequence		R	Q	K	R	D	I	L	V	N	A	L	N	E	S	R	L	E	I	L	P	C	E	G	T	Y	F	L	L	V	D	Y	S	A	V	S	T	L	.	.	.	.	D	D	V	E	F	C	Q	W	L	T	Q	E	H	G	V	A	A	I	P	L	S	V	F	C	A	D	P	F	P	H	K	L	I	R	L	C	F	A	K
Query Conservation																																							.	.	.	.
Alig confidence																																							.	.	.	.																												.	.
Template Conservation																																																																						.	.
Template Sequence		G	K	R	H	K	H	F	T	N	G	L	E	V	V	G	I	K	C	L	K	N	N	A	G	L	F	C	W	M	D	L	R	P	L	L	R	E	S	T	F	D	S	E	M	S	L	W	R	V	I	I	N	D	V	K	L	N	V	S	P	G	S	S	F	E	C	Q	E	.	.	P	G	W	F	R	V	C	F	A	N
Template Known Secondary structure															T	T			B				S	S	S	S							G	G	G		S	S	S	S														T	S							G	G	G	G	T		S	S	.	.	S	S							S	S
Template Predicted Secondary structure																																																																						.	.
Template SS confidence
		340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.			.	.	410	.	.	.	.	.	.	.
			372	.	.	.	.	.	.	.	380	.	.	.	.	.
Predicted Secondary structure		.
Query SS confidence		.
Query Sequence		.	K	E	S	T	L	L	A	A	A	E	R	L	R	Q
Query Conservation		.
Alig confidence		.
Template Conservation
Template Sequence		M	D	D	G	T	V	D	I	A	L	A	R	I	R	R
Template Known Secondary structure		S
Template Predicted Secondary structure
Template SS confidence
		418	.	420	.	.	.	.	.	.	.	.	.	430	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions