Phyre 2 alignment of P77806 with d1fg7a

Job Description P77806
Confidence 100.00% Date Thu Jan 5 12:33:00 GMT 2012

Rank 75 Aligned Residues 325

% Identity 18% Template d1fg7a_

SCOP info PLP-dependent transferase-like PLP-dependent transferases AAT-like

Resolution 1.50

	Insertion relative to template
	Deletion relative to template
	Catalytic residue from the CSA

Detailed help on interpreting your alignment

	29	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence	Q	H	Q	A	I	N	L	S	Q	G	F	P	D	F	D	G	P	R	Y	L	Q	E	R	L	A	H	H	V	A	Q	G	A	N	Q	Y	A	P	M	T	G	V	Q	A	L	R	E	A	I	A	Q	K	T	E	R	L	Y	G	Y	Q	P	D	A	D	S	D	I	T	V	T	A	G	A	T	E	A	L	Y	A	A	I
Query Conservation
Alig confidence																							.	.	.	.	.	.	.												.												.	.	.	.	.	.						.
Template Conservation																							.	.	.	.	.	.	.												.												.	.	.	.	.	.						.
Template Sequence	G	N	G	D	V	W	L	N	A	N	E	Y	P	T	A	V	E	F	Q	L	T	Q	.	.	.	.	.	.	.	Q	T	L	N	R	Y	P	E	C	Q	P	.	K	A	V	I	E	N	Y	A	Q	Y	A	.	.	.	.	.	.	G	V	K	P	E	.	Q	V	L	V	S	R	G	A	D	E	G	I	E	L	L	I
Template Known Secondary structure	T	T		S				S	S				S	S									.	.	.	.	.	.	.			T	T	S				S	S		.												.	.	.	.	.	.	T	S		G	G	.	G					S
Template Predicted Secondary structure																							.	.	.	.	.	.	.												.												.	.	.	.	.	.						.
Template SS confidence
	28	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.								50	.	.	.	.	.	.	.	.	.	60		.	.	.	.	.	.	.	.	.	70	.							.	.	.	.	.		.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.

	109	110	.	.	.	.	.		.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.
Predicted Secondary structure								.
Query SS confidence								.
Query Sequence	T	A	L	V	R	N	G	.	D	E	V	I	C	F	D	P	S	Y	D	S	Y	A	P	A	I	A	L	S	G	G	I	V	K	R	M	A	L	Q	P	P	H	F	R	V	D	W	Q	E	F	A	A	L	L	S	E	R	T	R	L	V	I	L	N	T	P	H	N	P	S	A	T	V	W	Q	Q	A	D	F	A	A
Query Conservation								.
Alig confidence								.																																	.	.
Template Conservation																																									.	.
Template Sequence	R	A	F	C	E	P	G	K	D	A	I	L	Y	C	P	P	T	Y	G	X	Y	S	V	S	A	E	T	I	G	V	E	C	R	T	V	P	T	L	D	N	.	.	W	Q	L	D	L	Q	G	I	S	D	K	L	D	G	V	K	V	V	Y	V	C	S	P	N	N	P	T	G	Q	L	I	N	P	Q	D	F	R	T
Template Known Secondary structure						T	T	T							S	S	S		T										T										T	T	.	.	S									T	S		T	T								S	S		T	T	T
Template Predicted Secondary structure																																									.	.
Template SS confidence
	93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.			.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170

	188	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence	L	W	Q	A	I	A	G	H	E	I	F	V	I	S	D	E	V	Y	E	H	I	N	F	S	Q	Q	G	H	A	S	V	L	A	H	P	Q	L	R	E	R	A	V	A	V	S	S	F	G	K	T	Y	H	M	T	G	W	K	V	G	Y	C	V	A	P	A	P	I	S	A	E	I	R	K	V	H	Q	Y	L	T	F
Query Conservation
Alig confidence														.												.	.	.	.																																																	.
Template Conservation														.												.	.	.	.																																																	.
Template Sequence	L	L	E	L	T	R	G	K	A	I	V	V	A	.	D	E	A	Y	I	E	F	C	P	Q	A	.	.	.	.	S	L	A	G	W	L	A	E	Y	P	H	L	A	I	L	R	T	L	S	K	A	F	A	L	A	G	L	R	C	G	F	T	L	A	N	E	E	V	I	N	L	L	X	K	V	I	A	P	.	Y	P
Template Known Secondary structure						T	T	T						.			T	T	G	G	G	S	G	G	G	.	.	.	.		S	G	G	G	T	T	T		T	T							S	S	S	T	T			G	G	G																			S		S	.	S
Template Predicted Secondary structure														.												.	.	.	.																																																	.
Template SS confidence
	171	.	.	.	.	.	.	.	.	180	.	.	.		.	.	.	.	.	.	190	.	.	.	.					.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.		.	.

	268	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310		.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.
Predicted Secondary structure																																												.
Query SS confidence																																												.
Query Sequence	S	V	N	T	P	A	Q	L	A	L	A	D	M	L	R	A	E	P	E	H	Y	L	A	L	P	D	F	Y	R	Q	K	R	D	I	L	V	N	A	L	N	E	S	R	.	L	E	I	L	P	C	E	G	T	Y	F	L	L	V	D	Y	S	A	V	S	T	L	D	D	V	E	F	C	Q	W	L	T	Q	E	H	G
Query Conservation																																												.
Alig confidence																																												.																		.	.	.	.	.											.
Template Conservation																																																														.	.	.	.	.											.
Template Sequence	L	S	T	P	V	A	D	I	A	A	Q	A	L	S	P	Q	G	I	V	A	X	R	E	R	V	A	Q	I	I	A	E	R	E	Y	L	I	A	A	L	K	E	I	P	C	V	E	Q	V	F	D	S	E	T	N	Y	I	L	A	R	F	K	.	.	.	.	.	A	S	S	A	V	F	K	S	L	W	.	D	Q	G
Template Known Secondary structure	S												T	S																												S	T	T								S	S	S							T	.	.	.	.	.	T										.		T	T
Template Predicted Secondary structure																																																														.	.	.	.	.											.
Template SS confidence
	245	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.						.	.	.	.	310	.	.	.	.	.		.	.	.

	347	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence	V	A	A	I	P	L	S	V	F	C	A	D	P	F	P	H	K	L	I	R	L	C	F	A	K	K	E	S	T	L	L	A	A	A	E	R	L	R	Q	L
Query Conservation
Alig confidence										.	.	.													.
Template Conservation										.	.	.													.
Template Sequence	I	I	L	R	D	Q	N	K	Q	.	.	.	P	S	L	S	G	C	L	R	I	T	V	G	.	T	R	E	E	S	Q	R	V	I	D	A	L	R	A	E
Template Known Secondary structure							T	T	S	.	.	.	T	T		T	T								.														T
Template Predicted Secondary structure										.	.	.													.
Template SS confidence
	319	320	.	.	.	.	.	.	.				.	.	330	.	.	.	.	.	.	.	.	.		340	.	.	.	.	.	.	.	.	.	350	.	.	.	.

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No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server

Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]

© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys
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