Job Description P77806 Confidence 99.80% Date Thu Jan 5 12:33:00 GMT 2012 Rank 222 Aligned Residues 355 % Identity 14% Template d1ejia_ SCOP info PLP-dependent transferase-like PLP-dependent transferases GABA-aminotransferase-like Resolution 2.90

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		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.								.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure																				.																														.	.	.	.	.	.	.
Query SS confidence																				.																														.	.	.	.	.	.	.
Query Sequence		L	P	Q	L	G	T	T	I	F	T	Q	M	S	A	L	A	Q	Q	.	H	Q	A	I	N	L	S	Q	G	F	P	D	F	D	G	P	R	Y	L	Q	E	R	L	A	H	H	V	A	Q	.	.	.	.	.	.	.	G	A	N	Q	Y	A	P	M	T	G	V	Q	A	L	R	E	A	I	A	Q	K	T	E	R	L
Query Conservation																				.																														.	.	.	.	.	.	.
Alig confidence																				.												.	.																	.	.	.	.	.	.	.
Template Conservation																																.	.
Template Sequence		L	K	D	S	D	A	E	V	Y	S	I	I	K	K	E	S	N	R	Q	R	V	G	L	E	L	I	A	S	E	N	.	.	F	A	S	R	A	V	L	E	A	L	G	S	S	L	N	N	K	Y	S	E	G	Y	P	G	Q	R	Y	Y	G	G	T	E	F	I	D	E	L	E	X	L	C	Q	K	R	A	L	Q	A
Template Known Secondary structure						T																S	S					T	T			.	.											T	S	G	G	G	G					S		S	S	S		S	S	S
Template Predicted Secondary structure																																.	.
Template SS confidence
		26	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.			.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.					.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.											.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																	.	.	.	.																																		.	.	.	.	.	.	.	.	.	.
Query SS confidence																	.	.	.	.																																		.	.	.	.	.	.	.	.	.	.
Query Sequence		Y	G	Y	Q	P	D	A	D	S	D	I	T	V	T	A	.	.	.	.	G	A	T	E	A	L	Y	A	A	I	T	A	L	V	R	N	G	D	E	V	I	C	F	D	P	S	Y	D	S	Y	A	P	A	.	.	.	.	.	.	.	.	.	.	I	A	L	S	G	G	I	V	K	R	M	A	L	Q	P	P	H	F
Query Conservation																	.	.	.	.																																		.	.	.	.	.	.	.	.	.	.
Alig confidence					.	.	.	.									.	.	.	.																																		.	.	.	.	.	.	.	.	.	.
Template Conservation					.	.	.	.
Template Sequence		Y	H	L	.	.	.	.	D	P	Q	C	W	G	V	N	V	Q	P	Y	S	G	S	P	A	N	F	A	V	Y	T	A	L	V	E	P	H	G	R	I	X	G	L	D	L	P	D	G	G	H	L	T	H	G	F	X	T	D	K	K	K	I	S	A	T	S	I	F	F	E	S	X	P	Y	K	V	Y	P	E	T	G
Template Known Secondary structure		T	T		.	.	.	.		T	T	T								S	S													T		T	T								G	G	G	T			G	G	G			B		S	S		B		S						S							B		T	T	T
Template Predicted Secondary structure					.	.	.	.
Template SS confidence
		104	.	.					.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.
		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	V	D	W	Q	E	F	A	A	L	L	S	E	R	T	R	L	V	I	L	N	T	P	H	N	P	S	A	T	V	W	Q	Q	A	D	F	A	A	L	W	Q	A	I	A	G	H	E	I	F	V	I	S	D	E	V	Y	E	H	I	N	F	S	Q	Q	G	H	A	S	V	L	A	H	P	Q	L	R	E	R	A	V
Query Conservation
Alig confidence																													.	.	.	.																																												.	.	.	.	.
Template Conservation																													.	.	.	.																																												.	.	.	.	.
Template Sequence		Y	I	N	Y	D	Q	L	E	E	N	A	S	L	F	H	P	K	L	I	I	A	G	T	S	C	Y	S	.	.	.	.	R	N	L	D	Y	A	R	L	R	K	I	A	D	D	N	G	A	Y	L	X	A	D	X	A	H	I	S	G	L	V	A	A	G	V	V	P	S	P	F	E	H	C	H	.	.	.	.	.	V
Template Known Secondary structure		S	B															S							S	S			.	.	.	.	S														T	T								G	G	G						T	T	S	S			G	G	G	T		S	.	.	.	.	.
Template Predicted Secondary structure																													.	.	.	.																																												.	.	.	.	.
Template SS confidence
		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.					.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.						250
		230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.																.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.			.	280	.	.	.	.	.	.	.	.	.	290	.	.
Predicted Secondary structure																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.
Query SS confidence																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.
Query Sequence		A	V	S	S	F	G	K	T	Y	H	M	T	G	W	K	V	G	Y	C	V	A	P	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	I	S	A	E	I	R	K	V	H	Q	Y	L	T	F	S	V	N	T	P	A	Q	L	A	L	A	.	.	D	M	L	R	A	E	P	E	H	Y	L	A	L	P
Query Conservation																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.
Alig confidence											.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.
Template Conservation											.	.
Template Sequence		V	T	T	T	T	H	K	T	L	.	.	R	G	C	R	A	G	X	I	F	Y	R	K	G	V	R	S	V	D	P	K	T	G	K	E	T	Y	Y	E	L	E	S	L	I	N	S	A	V	F	P	G	L	Q	G	G	P	H	N	H	A	I	A	G	V	A	V	A	L	K	Q	A	X	T	T	E	F	K	I	Y	Q
Template Known Secondary structure						S	S	G	G	G	.	.				S															S	T	T																	T	T	T	T			S																	T	S
Template Predicted Secondary structure											.	.
Template SS confidence
		251	.	.	.	.	.	.	.	.			260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.
		293	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.		.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.		.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																											.																																					.																	.
Query SS confidence																											.																																					.																	.
Query Sequence		D	F	Y	R	Q	K	R	D	I	L	V	N	A	L	N	E	S	R	L	E	I	L	P	C	E	.	G	T	Y	F	L	L	V	D	Y	S	A	V	S	T	L	D	D	V	E	F	C	Q	W	L	T	Q	E	H	G	V	A	A	I	P	L	S	.	V	F	C	A	D	P	F	P	H	K	L	I	R	L	C	F	.
Query Conservation																											.																																					.																	.
Alig confidence																											.													.												.												.																	.
Template Conservation																																								.												.
Template Sequence		L	Q	V	L	A	N	C	R	A	L	S	D	A	L	T	E	L	G	Y	K	I	V	T	G	G	S	D	N	H	L	I	L	X	D	L	R	S	K	.	G	T	D	G	G	R	A	E	K	V	L	.	E	A	C	S	I	A	C	N	K	N	T	C	P	G	D	K	S	A	L	R	P	S	G	L	R	L	G	T	P
Template Known Secondary structure																		T	T			B	T	T	S	S		S	S	S						G	G	G	G	.	T											.			T	T				B					S	S	S	S		T	T	S		S
Template Predicted Secondary structure																																								.												.
Template SS confidence
		329	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.		.	.	.	370	.	.	.	.	.	.	.		.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.
							370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.
Query SS confidence		.	.	.	.	.
Query Sequence		.	.	.	.	.	A	K	K	E	S	T	L	L	A	A	A	E	R	L	R	Q
Query Conservation		.	.	.	.	.
Alig confidence		.	.	.	.	.
Template Conservation
Template Sequence		A	L	T	S	R	G	L	L	E	E	D	F	Q	K	V	A	H	F	I	H	R
Template Known Secondary structure					T	T	T
Template Predicted Secondary structure
Template SS confidence
		407	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions