Job Description P77806 Confidence 99.85% Date Thu Jan 5 12:33:00 GMT 2012 Rank 202 Aligned Residues 362 % Identity 14% Template d1bj4a_ SCOP info PLP-dependent transferase-like PLP-dependent transferases GABA-aminotransferase-like Resolution 2.65

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		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.								.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure																						.																														.	.	.	.	.	.	.
Query SS confidence																						.																														.	.	.	.	.	.	.
Query Sequence		S	K	L	P	Q	L	G	T	T	I	F	T	Q	M	S	A	L	A	Q	Q	.	H	Q	A	I	N	L	S	Q	G	F	P	D	F	D	G	P	R	Y	L	Q	E	R	L	A	H	H	V	A	Q	.	.	.	.	.	.	.	G	A	N	Q	Y	A	P	M	T	G	V	Q	A	L	R	E	A	I	A	Q	K	T	E
Query Conservation																						.																														.	.	.	.	.	.	.
Alig confidence																						.												.	.																	.	.	.	.	.	.	.
Template Conservation																																		.	.
Template Sequence		Q	P	L	K	D	S	D	V	E	V	Y	N	I	I	K	K	E	S	N	R	Q	R	V	G	L	E	L	I	A	S	E	N	.	.	F	A	S	R	A	V	L	E	A	L	G	S	C	L	N	N	K	Y	S	E	G	Y	P	G	Q	R	Y	Y	G	G	T	E	F	I	D	E	L	E	T	L	C	Q	K	R	A	L
Template Known Secondary structure		S						T																	S					T	T			.	.											T	S	G	G	G	T							T	T			S	S	S
Template Predicted Secondary structure																																		.	.
Template SS confidence
		24	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.			.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.											.	.	140	.	.	.	.	.	.	.	.	.	150	.
Predicted Secondary structure																																																										.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																										.	.	.	.	.	.	.	.	.	.
Query Sequence		R	L	Y	G	Y	Q	P	D	A	D	S	D	I	T	V	T	A	G	A	T	E	A	L	Y	A	A	I	T	A	L	V	R	N	G	D	E	V	I	C	F	D	P	S	Y	D	S	Y	A	P	A	I	A	L	S	G	G	.	.	.	.	.	.	.	.	.	.	I	V	K	R	M	A	L	Q	P	P	H	F	R	V
Query Conservation																																																										.	.	.	.	.	.	.	.	.	.
Alig confidence																																																										.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Q	A	Y	K	L	D	P	Q	C	W	G	V	N	V	Q	P	Y	S	G	S	P	A	N	F	A	V	Y	T	A	L	V	E	P	H	G	R	I	M	G	L	D	L	P	D	G	G	H	L	T	H	G	F	M	T	D	K	K	K	I	S	A	T	S	I	F	F	E	S	M	P	Y	K	V	N	P	D	T	G	Y	I
Template Known Secondary structure				T	T			T	T	T								S	S													T		T	T								G	G	G	T			G	G	G			B		S	S		B		S						S							B		T	T	T		S	B
Template Predicted Secondary structure
Template SS confidence
		102	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.
		152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	W	Q	E	F	A	A	L	L	S	E	R	T	R	L	V	I	L	N	T	P	H	N	P	S	A	T	V	W	Q	Q	A	D	F	A	A	L	W	Q	A	I	A	G	H	E	I	F	V	I	S	D	E	V	Y	E	H	I	N	F	S	Q	Q	G	H	A	S	V	L	A	H	P	Q	L	R	E	R	A	V	A	V
Query Conservation
Alig confidence																														.	.	.	.																																									.	.	.	.	.
Template Conservation																														.	.	.	.																																									.	.	.	.	.
Template Sequence		N	Y	D	Q	L	E	E	N	A	R	L	F	H	P	K	L	I	I	A	G	T	S	C	Y	S	R	N	L	.	.	.	.	E	Y	A	R	L	R	K	I	A	D	E	N	G	A	Y	L	M	A	D	M	A	H	I	S	G	L	V	A	A	G	V	V	P	S	P	F	E	H	C	H	.	.	.	.	.	V	V	T
Template Known Secondary structure																S							S	S			S			.	.	.	.												T	T								G	G	G						T	T	S	S			G	G	G	T		S	.	.	.	.	.
Template Predicted Secondary structure																														.	.	.	.																																									.	.	.	.	.
Template SS confidence
		182	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.					210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.						250	.	.
		232	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.																.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.			.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.
Predicted Secondary structure																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.
Query SS confidence																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.
Query Sequence		S	S	F	G	K	T	Y	H	M	T	G	W	K	V	G	Y	C	V	A	P	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	I	S	A	E	I	R	K	V	H	Q	Y	L	T	F	S	V	N	T	P	A	Q	L	A	L	A	.	.	D	M	L	R	A	E	P	E	H	Y	L	A	L	P	D	F
Query Conservation																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.
Alig confidence									.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.
Template Conservation									.	.
Template Sequence		T	T	T	H	K	T	L	.	.	R	G	C	R	A	G	M	I	F	Y	R	K	G	V	K	S	V	D	P	A	T	G	K	E	I	L	Y	N	L	E	S	L	I	N	S	A	V	F	P	G	L	Q	G	G	P	H	N	H	A	I	A	G	V	A	V	A	L	K	Q	A	M	T	L	E	F	K	V	Y	Q	H	Q
Template Known Secondary structure				S	S	G	G	G	.	.				S									S						T	T	T																	T	T	T	T			S																T	T	S
Template Predicted Secondary structure									.	.
Template SS confidence
		253	.	.	.	.	.	.			260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330
		295	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.		.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.		350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																					.																																					.																					.	.	.
Query SS confidence																					.																																					.																					.	.	.
Query Sequence		Y	R	Q	K	R	D	I	L	V	N	A	L	N	E	S	R	L	E	I	.	L	P	C	E	G	T	Y	F	L	L	V	D	Y	S	A	V	S	T	L	D	D	V	E	F	C	Q	W	L	T	Q	E	H	G	V	A	A	.	I	P	L	S	V	F	C	A	D	P	F	P	H	K	L	I	R	L	C	F	.	.	.
Query Conservation																					.																																					.																					.	.	.
Alig confidence																					.																.													.								.																					.	.	.
Template Conservation																																					.													.
Template Sequence		V	V	A	N	C	R	A	L	S	E	A	L	T	E	L	G	Y	K	I	V	T	G	G	S	D	N	H	L	I	L	V	D	L	R	S	.	K	G	T	D	G	G	R	A	E	K	V	L	.	E	A	C	S	I	A	C	N	K	N	T	C	P	G	D	R	S	A	L	R	P	S	G	L	R	L	G	T	P	A	L
Template Known Secondary structure																T	T				T	T	S	S		S	S	S						G	G	G	.	G	T											.			T	T									T	T		S		T	T	S
Template Predicted Secondary structure																																					.													.
Template SS confidence
		331	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.		.	.	.	.	370	.	.	.	.	.	.	.		.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.
					370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.
Predicted Secondary structure		.	.	.
Query SS confidence		.	.	.
Query Sequence		.	.	.	A	K	K	E	S	T	L	L	A	A	A	E	R	L	R	Q	L
Query Conservation		.	.	.
Alig confidence		.	.	.
Template Conservation
Template Sequence		T	S	R	G	L	L	E	K	D	F	Q	K	V	A	H	F	I	H	R	G
Template Known Secondary structure				T	T
Template Predicted Secondary structure
Template SS confidence
		409	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions