Return to main results Retrieve Phyre Job Id

Job DescriptionP77806
Confidence99.97%DateThu Jan 5 12:33:00 GMT 2012
Rank99Aligned Residues320
% Identity19%Templated1b9ha_
SCOP infoPLP-dependent transferase-like PLP-dependent transferases GABA-aminotransferase-like
Resolution2.00

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  PDFDGP. . . . RYLQERLAHHVAQGANQYAPMTGVQALREAIAQKTERLYGYQPDADSDITVTAGATEALYAAITAL. VRN
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Template Sequence  PEFPAWPQYDDAERNGLVRALEQGQWWRMGGDEVNSFEREFAAHHGAA. . . . . . . . . HALAVTNGTHALELALQVMGVGP
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SS


TS

BTTT
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T
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   115....120.........130.........140.........150.........160.........170.........180.........190....
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Query Sequence  GDEVICFDPSYDSYAPAIALSGGIVKRMALQPPHFRVDWQEFAALLSERTRLVILNTPHNPSATVWQQADFAALWQAIAG
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Template Sequence  GTEVIVPAFTFISSSQAAQRLGAVTVPVDVDAATYNLDPEAVAAAVTPRTKV. . . IMPVHMAGLMAD. . . MDALAKISAD
Template Known Secondary structure  T
SSS
TTT

B
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GGG



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   78.80.........90.........100.........110.........120......... 130.........140. ........150.
 
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Query Sequence  HEIFVISDEVYEHINFSQQGHASVLAHPQLRERAVAVSSFGKTYHMTGWKVGYCVAP. APISAEIRKVHQYLTFS. . . . .
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Template Sequence  TGVPLLQDAAHAHGA. . . . . . . RWQGKRVGELDSIATFSFQNGKLMTAGEGGAVVFPDGETEKYETAFLRHSCGRPRDDR
Template Known Secondary structure  T

B

TT
TT
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TT
TBTT

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   152.......160...... ...170.........180.........190.........200.........210.........220....
 
   269270.........280.........290.........300......... 310......... 320.........
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Query Sequence  . . . . . . . . . . . . VNTPAQLALADMLRAEPEHYLALPDFYRQKRDILVNALNES. RLEILPCEGT. . . . . . YFLLVDYSAV
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Template Sequence  RYFHKIAGSNMRLNEFSASVLRAQLAR. . . . LDEQIAVRDERWTLLSRLLGAIDGVVPQGGDVRADRNSHYMAMFRIPGL
Template Known Secondary structure  S



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B
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BTT....TSTT




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   225....230.........240.........250. ........260.........270.........280.........290.........300
 
   330.........340.........350.........360 .........370 .........380.
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Query Sequence  STLDDVEFCQWLTQEHGVAAIPLSVFCADPF. . . . . . . . . . . . . . . . . . . . . . . . . PHKLIRLCFA. . . KKESTLLAAAE
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Template Sequence  TEERRNALVDRL. VEAGLPAFAAFRAIYRTDAFWELGAPDESVDAIARRCPNTDAISSDCVWLHHRVLLAGEPELHATAE
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GGGSSS

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   301........310.. .......320.........330.........340.........350.........360.........370.........
 
   382....
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Query Sequence  RLRQL
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Template Sequence  IIADA
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   380....
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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