Job Description P77806 Confidence 99.89% Date Thu Jan 5 12:33:00 GMT 2012 Rank 182 Aligned Residues 357 % Identity 16% Template d1ax4a_ SCOP info PLP-dependent transferase-like PLP-dependent transferases Beta-eliminating lyases Resolution 2.10

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		21	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.						.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.
Predicted Secondary structure																								.	.	.	.	.
Query SS confidence																								.	.	.	.	.
Query Sequence		T	Q	M	S	A	L	A	Q	Q	H	Q	A	I	N	L	S	Q	G	F	P	D	F	.	.	.	.	.	D	G	P	R	Y	L	Q	E	R	L	A	H	H	V	A	Q	G	A	N	Q	Y	A	P	M	T	G	V	Q	A	L	R	E	A	I	A	Q	K	T	E	R	L	Y	G	Y	Q	P	D	A	D	S	D	I	T
Query Conservation																								.	.	.	.	.
Alig confidence																								.	.	.	.	.																																						.	.	.	.					.	.	.	.	.
Template Conservation																																																																		.	.	.	.					.	.	.	.	.
Template Sequence		R	E	A	A	L	K	E	A	G	Y	N	P	F	L	L	P	S	S	A	V	Y	I	D	L	L	T	D	S	G	T	N	A	M	S	D	H	Q	W	A	A	M	I	T	G	D	E	A	Y	A	G	S	R	N	Y	Y	D	L	K	D	K	A	K	E	L	.	.	.	.	F	N	Y	D	.	.	.	.	.	Y	I	I
Template Known Secondary structure									T	T	S		G	G	G	S		G	G	G		S				S		S	S	S														T					S	S	S															.	.	.	.					.	.	.	.	.
Template Predicted Secondary structure																																																																		.	.	.	.					.	.	.	.	.
Template SS confidence
		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.					.	90	.	.						.	.	.
		96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.								.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.										.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																								.	.	.	.	.	.	.																															.	.	.	.	.	.	.	.	.
Query SS confidence																								.	.	.	.	.	.	.																															.	.	.	.	.	.	.	.	.
Query Sequence		V	T	A	G	A	T	E	A	L	Y	A	A	I	T	A	L	V	R	N	G	D	E	.	.	.	.	.	.	.	V	I	C	F	D	P	S	Y	D	S	Y	A	P	A	I	A	L	S	G	G	I	V	K	R	M	A	L	Q	P	P	.	.	.	.	.	.	.	.	.	H	F	R	V	D	W	Q	E	F	A	A	L
Query Conservation																								.	.	.	.	.	.	.																															.	.	.	.	.	.	.	.	.
Alig confidence																								.	.	.	.	.	.	.																															.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		P	A	H	Q	G	R	G	A	E	N	I	L	F	P	V	L	L	K	Y	K	Q	K	E	G	K	A	K	N	P	V	F	I	S	N	F	H	F	D	T	T	A	A	H	V	E	L	N	G	C	K	A	I	N	I	V	T	E	K	A	F	D	S	E	T	Y	D	D	W	K	G	D	F	D	I	K	K	L	K	E	N
Template Known Secondary structure				S	S																			T	T			S	S						S	S												T	T							B		G	G	G	G		T	T	S			T	T	T	T		B
Template Predicted Secondary structure
Template SS confidence
		96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.
		160	.	.					.	.	.	.	.	.	.	170	.	.	.	.	.	.		.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.											.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
Predicted Secondary structure					.	.	.	.															.																																	.	.	.	.	.	.	.	.	.	.
Query SS confidence					.	.	.	.															.																																	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	S	E	.	.	.	.	R	T	R	L	V	I	L	N	T	P	H	N	P	S	.	A	T	V	W	Q	Q	A	D	F	A	A	L	W	Q	A	I	A	G	H	E	I	F	V	I	S	D	E	V	Y	E	H	I	.	.	.	.	.	.	.	.	.	.	N	F	S	Q	Q	G	H	A	S	V	L	A	H	P	Q	L
Query Conservation					.	.	.	.															.																																	.	.	.	.	.	.	.	.	.	.
Alig confidence					.	.	.	.															.																																	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	A	Q	H	G	A	D	N	I	V	A	I	V	S	T	V	T	C	N	S	A	G	G	Q	P	V	S	M	S	N	L	K	E	V	Y	E	I	A	K	Q	H	G	I	F	V	V	M	D	S	A	R	F	C	E	N	A	Y	F	I	K	A	R	D	P	K	Y	K	N	A	T	I	K	E	V	I	F	D	M	Y	K
Template Known Secondary structure							G	G	G								S	S	B	T	T	T	T	S	B																		T								T	T													G	G	G	T	T											G	G
Template Predicted Secondary structure
Template SS confidence
		176	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.
		225	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.		.	290	.	.	.	.	.	.	.	.	.	300	.	.	.
Predicted Secondary structure																																																																		.
Query SS confidence																																																																		.
Query Sequence		R	E	R	A	V	A	V	S	S	F	G	K	T	Y	H	M	T	G	W	K	V	G	Y	C	V	A	P	A	P	I	S	A	E	I	R	K	V	H	Q	Y	L	T	F	S	V	N	T	P	A	Q	L	A	L	A	D	M	L	R	A	E	P	E	H	Y	.	L	A	L	P	D	F	Y	R	Q	K	R	D	I	L	V
Query Conservation																																																																		.
Alig confidence																																																																		.
Template Conservation
Template Sequence		Y	A	D	A	L	T	M	S	A	K	D	P	L	L	N	I	G	G	L	V	A	I	R	D	N	E	E	I	F	T	L	A	R	Q	R	C	V	P	M	E	G	F	V	T	Y	G	G	L	A	G	R	D	M	A	A	M	V	Q	G	L	E	E	G	T	E	E	E	Y	L	H	Y	R	I	G	Q	V	K	Y	L	G
Template Known Secondary structure		G		S												S	S							S	S																T		S	T	T	T	T	T																T	T
Template Predicted Secondary structure
Template SS confidence
		256	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.
		304	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.							.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.										.	360	.	.	.	.	.	.	.	.
Predicted Secondary structure																														.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.
Query SS confidence																														.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.
Query Sequence		N	A	L	N	E	S	R	L	E	I	L	P	C	E	G	T	Y	F	L	L	V	D	Y	S	A	V	S	T	.	.	.	.	.	.	L	D	D	V	E	F	C	Q	W	L	T	Q	E	H	G	V	A	A	I	P	L	S	V	F	C	A	D	.	.	.	.	.	.	.	.	.	P	F	P	H	K	L	I	R	L	C
Query Conservation																														.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.
Alig confidence																														.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	R	L	R	E	A	G	I	P	I	Q	Y	P	T	G	G	H	A	V	F	V	D	C	K	K	L	V	P	Q	I	P	G	D	Q	F	P	A	Q	A	V	I	N	A	L	Y	L	E	S	G	V	R	A	V	E	I	G	S	F	L	L	G	R	D	P	A	T	G	E	Q	K	H	A	D	M	E	F	M	R	L	T
Template Known Secondary structure							T	T			B		S	S			S	S						S	T	T	T		T	T	S		G	G	G																						S						B		T	T	T		S	B				S
Template Predicted Secondary structure
Template SS confidence
		337	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.
		369	370	.				.	.	.	.	.	.	.	.	380	.	.	.	.	.	.
Predicted Secondary structure					.	.	.
Query SS confidence					.	.	.
Query Sequence		F	A	K	.	.	.	K	E	S	T	L	L	A	A	A	E	R	L	R	Q	L
Query Conservation					.	.	.
Alig confidence					.	.	.
Template Conservation
Template Sequence		I	A	R	R	V	Y	T	N	D	H	M	D	Y	I	A	D	A	L	I	G	L
Template Known Secondary structure				T	T	S	S														T	T
Template Predicted Secondary structure
Template SS confidence
		417	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions