Job Description P77806 Confidence 99.94% Date Thu Jan 5 12:33:00 GMT 2012 Rank 149 Aligned Residues 332 % Identity 14% Template c3ruyB_ PDB info PDB header:transferase Chain: B: PDB Molecule:ornithine aminotransferase; PDBTitle: crystal structure of the ornithine-oxo acid transaminase rocd from2 bacillus anthracis Resolution 2.65 Å

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		27	.	.	30	.	.	.	.	.			.	.	.	.	40	.	.	.		.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.
Predicted Secondary structure											.	.									.
Query SS confidence											.	.									.
Query Sequence		A	Q	Q	H	Q	A	I	N	L	.	.	S	Q	G	F	P	D	F	D	.	G	P	R	Y	L	Q	E	R	L	A	H	H	V	A	Q	G	A	N	Q	Y	A	P	M	T	G	V	Q	A	L	R	E	A	I	A	Q	K	T	E	R	L	Y	G	Y	Q	P	D	A	D	S	D	I	T	V	T	A	G	A	T	E	A
Query Conservation											.	.									.
Alig confidence											.	.									.																.	.																												.	.	.	.	.
Template Conservation																																					.	.																												.	.	.	.	.
Template Sequence		P	E	G	N	R	Y	M	D	L	L	S	A	Y	S	A	V	N	Q	G	H	R	H	P	K	I	I	N	A	L	I	D	Q	A	N	R	.	.	V	T	L	T	S	R	A	F	H	S	D	Q	L	G	P	W	Y	E	K	V	A	K	L	T	N	K	E	.	.	.	.	.	M	V	L	P	M	N	T	G	A	E	A
Template Known Secondary structure		T	T							S	S					T		T	T		B	T												T	T	T	.	.		S				T	T	S			S	S													T		S	.	.	.	.	.						S	S
Template Predicted Secondary structure																																					.	.																												.	.	.	.	.
Template SS confidence
		37	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.			.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.						.	100	.	.	.	.	.	.	.	.	.
		104	.	.	.	.	.	110	.	.												.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.							150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
Predicted Secondary structure											.	.	.	.	.	.	.	.	.	.	.																																						.	.	.	.	.	.
Query SS confidence											.	.	.	.	.	.	.	.	.	.	.																																						.	.	.	.	.	.
Query Sequence		L	Y	A	A	I	T	A	L	V	.	.	.	.	.	.	.	.	.	.	.	R	N	G	D	E	V	I	C	F	D	P	S	Y	D	S	Y	A	P	A	I	A	L	S	G	G	I	V	K	R	M	A	L	Q	P	P	H	F	.	.	.	.	.	.	R	V	D	W	Q	E	F	A	A	L	L	S	E	R	T	R	L
Query Conservation											.	.	.	.	.	.	.	.	.	.	.																																						.	.	.	.	.	.
Alig confidence											.	.	.	.	.	.	.	.	.	.	.																																						.	.	.	.	.	.
Template Conservation
Template Sequence		V	E	T	A	I	K	T	A	R	R	W	A	Y	D	V	K	K	V	E	A	N	R	A	E	I	I	V	C	E	D	N	F	H	G	R	T	M	G	A	V	S	M	S	S	N	E	E	Y	K	R	G	F	G	P	M	L	P	G	I	I	V	I	P	Y	G	D	L	E	A	L	K	A	A	I	T	P	N	T	A	A
Template Known Secondary structure																T	S				T	T								T	T					S	S					T	T		S		T	T	T	T	T	T			S			S	S						T	T											T	T
Template Predicted Secondary structure
Template SS confidence
		110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.
		167	.	.	170	.	.	.	.	.	.	.		.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.
Predicted Secondary structure													.
Query SS confidence													.
Query Sequence		V	I	L	N	T	P	H	N	P	S	A	.	T	V	W	Q	Q	A	D	F	A	A	L	W	Q	A	I	A	G	H	E	I	F	V	I	S	D	E	V	Y	E	H	I	N	F	S	Q	Q	G	H	A	S	V	L	A	H	P	Q	L	R	E	R	A	V	A	V	S	S	F	G	K	T	Y	H	M	T	G	W	K	V
Query Conservation													.
Alig confidence													.																																																	.	.	.	.	.										.
Template Conservation																																																														.	.	.	.	.										.
Template Sequence		F	I	L	E	P	I	Q	G	E	A	G	I	N	I	P	P	A	G	F	L	K	E	A	L	E	V	C	K	K	E	N	V	L	F	V	A	D	E	I	Q	T	G	L	G	R	T	G	K	V	F	A	C	D	W	D	N	V	T	P	D	.	.	.	.	.	M	Y	I	L	G	A	L	G	G	.	G	V	F	P	I
Template Known Secondary structure						S	S	B	T	T	T	T	S	B				T	T												T	T								T	T	T	T	T	T	T	T	S	S	S	S	G	G	G	G	G	T				S	.	.	.	.	.							T	T	T	.	T	T	S
Template Predicted Secondary structure																																																														.	.	.	.	.										.
Template SS confidence
		190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.						250	.	.	.	.	.	.	.	.		.	260	.	.	.
		246	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310			.	.	.	.	.	.	.	.	.	320	.	.	.
Predicted Secondary structure																																																																			.	.
Query SS confidence																																																																			.	.
Query Sequence		G	Y	C	V	A	P	A	P	I	S	A	E	I	R	K	V	H	Q	Y	L	T	F	S	V	N	T	P	A	Q	L	A	L	A	D	M	L	R	A	E	P	E	H	Y	L	A	L	P	D	F	Y	R	Q	K	R	D	I	L	V	N	A	L	N	E	S	R	.	.	L	E	I	L	P	C	E	G	T	Y	F	L	L
Query Conservation																																																																			.	.
Alig confidence																																							.	.																											.	.
Template Conservation																																							.	.
Template Sequence		S	C	A	A	A	N	R	D	I	L	G	V	F	E	P	G	S	H	G	S	T	F	G	G	N	P	L	A	C	A	V	S	I	A	A	L	E	.	.	V	L	E	E	E	K	L	T	E	R	S	L	Q	L	G	E	K	L	V	G	Q	L	K	E	I	D	N	P	M	I	T	E	V	R	G	K	G	L	F	I	G
Template Known Secondary structure												T	T			T	T	S	S			S	S	T	T														.	.					T	T																	T	T				T	T								T	T
Template Predicted Secondary structure																																							.	.
Template SS confidence
		265	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.			.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.
		324	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.			.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.
Predicted Secondary structure																																														.	.
Query SS confidence																																														.	.
Query Sequence		V	D	Y	S	A	V	S	T	L	D	D	V	E	F	C	Q	W	L	T	Q	E	H	G	V	A	A	I	P	L	S	V	F	C	A	D	P	F	P	H	K	L	I	R	L	.	.	C	F	A	K	K	E	S	T	L	L	A	A	A	E	R	L	R	Q	L
Query Conservation																																														.	.
Alig confidence							.	.	.	.													.							.	.	.	.	.	.	.	.									.	.
Template Conservation							.	.	.	.													.							.	.	.	.	.	.	.	.
Template Sequence		I	E	L	N	E	.	.	.	.	P	A	R	P	Y	C	E	Q	L	K	A	A	.	G	L	L	C	K	E	.	.	.	.	.	.	.	.	T	H	E	N	V	I	R	I	A	P	P	L	V	I	S	E	E	D	L	E	W	A	F	Q	K	I	K	A	V
Template Known Secondary structure					S	S	.	.	.	.		S											.	T						.	.	.	.	.	.	.	.		T	T	T								T	T
Template Predicted Secondary structure							.	.	.	.													.							.	.	.	.	.	.	.	.
Template SS confidence
		343	.	.	.	.					.	.	350	.	.	.	.	.	.	.	.	.		360	.	.	.	.	.									.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions