Job Description P77806 Confidence 100.00% Date Thu Jan 5 12:33:00 GMT 2012 Rank 62 Aligned Residues 354 % Identity 21% Template c3op7A_ PDB info PDB header:transferase Chain: A: PDB Molecule:aminotransferase class i and ii; PDBTitle: crystal structure of a plp-dependent aminotransferase (zp_03625122.1)2 from streptococcus suis 89-1591 at 1.70 a resolution Resolution 1.70 Å

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		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.								.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
Predicted Secondary structure																														.	.	.	.	.	.	.
Query SS confidence																														.	.	.	.	.	.	.
Query Sequence		Q	L	G	T	T	I	F	T	Q	M	S	A	L	A	Q	Q	H	Q	A	I	N	L	S	Q	G	F	P	D	.	.	.	.	.	.	.	F	D	G	P	R	Y	L	Q	E	R	L	A	H	H	V	A	Q	G	A	N	Q	Y	A	P	M	T	G	V	Q	A	L	R	E	A	I	A	Q	K	T	E	R	L	Y	G	Y
Query Conservation																														.	.	.	.	.	.	.
Alig confidence																														.	.	.	.	.	.	.																																									.	.	.	.	.
Template Conservation																																																																													.	.	.	.	.
Template Sequence		K	L	P	R	F	G	V	E	E	W	L	N	V	H	E	N	S	A	I	Y	D	I	A	G	V	S	I	S	S	L	T	L	E	E	L	F	A	L	S	G	T	N	P	E	D	F	Y	K	K	L	Q	G	T	K	L	N	Y	G	W	I	E	G	S	P	A	F	K	K	S	V	S	Q	L	Y	T	.	.	.	.	.
Template Known Secondary structure		S	S													G	G	G		S							S														T												T	S			S	S			T	T											T	T	S	S	.	.	.	.	.
Template Predicted Secondary structure																																																																													.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.		.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
Predicted Secondary structure																																																																.
Query SS confidence																																																																.
Query Sequence		Q	P	D	A	D	S	D	I	T	V	T	A	G	A	T	E	A	L	Y	A	A	I	T	A	L	V	R	N	G	D	E	V	I	C	F	D	P	S	Y	D	S	Y	A	P	A	I	A	L	S	G	G	I	V	K	R	M	A	L	Q	P	P	H	.	F	R	V	D	W	Q	E	F	A	A	L	L	S	E	R	T	R
Query Conservation																																																																.
Alig confidence							.																																																									.
Template Conservation							.
Template Sequence		G	V	K	P	E	.	Q	I	L	Q	T	N	G	A	T	G	A	N	L	L	V	L	Y	S	L	I	E	P	G	D	H	V	I	S	L	Y	P	T	Y	Q	Q	L	Y	D	I	P	K	S	L	G	A	E	V	D	L	W	Q	I	E	E	E	N	G	W	L	P	D	L	E	K	L	R	Q	L	I	R	P	T	T	K
Template Known Secondary structure		S			G	G	.	G					S																T	T								S	S		T									T	T										G	G	G	T	T													T	T
Template Predicted Secondary structure							.
Template SS confidence
		77	.	.	80	.		.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	V	I	L	N	T	P	H	N	P	S	A	T	V	W	Q	Q	A	D	F	A	A	L	W	Q	A	I	A	G	H	E	I	F	V	I	S	D	E	V	Y	E	H	I	N	F	S	Q	Q	G	H	A	S	V	L	A	H	P	Q	L	R	E	R	A	V	A	V	S	S	F	G	K	T	Y	H	M	T	G	W	K	V
Query Conservation
Alig confidence																																																									.	.	.	.	.												.
Template Conservation																																																									.	.	.	.	.												.
Template Sequence		X	I	C	I	N	N	A	N	N	P	T	G	A	V	X	D	R	T	Y	L	E	E	L	V	E	I	A	S	E	V	G	A	Y	I	L	S	D	E	V	Y	R	S	F	S	E	L	D	V	P	S	I	I	E	V	Y	.	.	.	.	.	D	K	G	I	A	V	N	S	L	S	T	.	Y	S	L	P	G	I	R	I
Template Known Secondary structure							S	S		T	T	T																		T	T	T									S				S	S	S										.	.	.	.	.	T	T										.		S		G	G	G
Template Predicted Secondary structure																																																									.	.	.	.	.												.
Template SS confidence
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210						.	.	.	.	.	.	.	.	.	220	.		.	.	.	.	.	.	.	.
		246	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310		.	.	.	.	.	.	.	.	.	320	.	.	.	.
Predicted Secondary structure																																																																			.
Query SS confidence																																																																			.
Query Sequence		G	Y	C	V	A	P	A	P	I	S	A	E	I	R	K	V	H	Q	Y	L	T	F	S	V	N	T	P	A	Q	L	A	L	A	D	M	L	R	A	E	P	E	H	Y	L	A	L	P	D	F	Y	R	Q	K	R	D	I	L	V	N	A	L	N	E	S	R	.	L	E	I	L	P	C	E	G	T	Y	F	L	L	V
Query Conservation																																																																			.
Alig confidence																																																																			.
Template Conservation
Template Sequence		G	W	V	A	A	N	H	Q	V	T	D	I	L	R	D	Y	R	D	Y	T	X	I	C	A	G	V	F	D	D	L	V	A	Q	L	A	L	A	H	Y	Q	E	I	L	E	R	N	R	H	I	L	E	E	N	L	A	I	L	D	Q	W	I	E	E	E	P	L	V	S	Y	I	R	P	A	V	V	S	T	S	F	V
Template Known Secondary structure															T	T	T	G	G	G	T	T	S																T																											T	T							S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		231	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310
		325	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	Y	S	A	V	S	T	L	D	D	V	E	F	C	Q	W	L	T	Q	E	H	G	V	A	A	I	P	L	S	V	F	C	A	D	P	F	P	H	K	L	I	R	L	C	F	A	K	K	E	S	T	L	L	A	A	A	E	R	L	R	Q
Query Conservation
Alig confidence						.	.																														.	.	.	.
Template Conservation						.	.																														.	.	.	.
Template Sequence		K	I	A	V	.	.	D	X	P	X	E	D	F	C	L	Q	L	L	Q	E	H	G	V	L	L	V	P	G	N	R	F	E	R	D	G	.	.	.	.	Y	V	R	L	G	F	A	C	E	Q	E	T	L	I	K	G	L	E	K	L	S	Q
Template Known Secondary structure						.	.	S	S																				G	G	G	G	T		T	T	.	.	.	.								S
Template Predicted Secondary structure						.	.																														.	.	.	.
Template SS confidence
		311	.	.	.			.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.					.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions